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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l09f
         (627 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde d...   258   4e-70
SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase...   258   5e-70
SPCC13B11.01 |adh1|adh|alcohol dehydrogenase Adh1|Schizosaccharo...    58   1e-09
SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces p...    39   7e-04
SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase ...    36   0.006
SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces pombe...    32   0.078
SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr...    27   2.2  
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ...    26   3.9  
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr...    26   5.1  
SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein Utp5|Schiz...    25   6.8  

>SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde
           dehydrogenase|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 380

 Score =  258 bits (633), Expect = 4e-70
 Identities = 114/196 (58%), Positives = 141/196 (71%)
 Frame = +3

Query: 39  TVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGV 218
           T GK+I C AAVAW+   PLSIE ++V PP+  EVR+KI  +GVCHTDAYTLSGKDPEG+
Sbjct: 6   TAGKIINCKAAVAWQPAAPLSIENVQVFPPRVHEVRIKIVNSGVCHTDAYTLSGKDPEGL 65

Query: 219 FPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQ 398
           FPV+L               T+V+ GD V+ LY P+C TCKFC + KTNLC ++R+TQG+
Sbjct: 66  FPVILGHEGAGIVESVGPQVTTVQVGDPVIALYTPECKTCKFCKSGKTNLCGRIRTTQGK 125

Query: 399 GVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGY 578
           G+MPDGT RF C G  L HFMGCSTFS+YTVV +IS+  +   APLD VCLLGCG+ TGY
Sbjct: 126 GLMPDGTSRFSCNGNTLLHFMGCSTFSEYTVVADISVVAIERLAPLDSVCLLGCGITTGY 185

Query: 579 GAALNTAKVEPGSNCA 626
           GAA  TA ++ G + A
Sbjct: 186 GAATITADIKEGDSVA 201


>SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 378

 Score =  258 bits (632), Expect = 5e-70
 Identities = 117/198 (59%), Positives = 143/198 (72%)
 Frame = +3

Query: 33  MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 212
           MS  GK I C AAVAW A +PLSIE+I+V PPKA EVRVK+  + VCHTDAYTLSG DPE
Sbjct: 1   MSFEGKTITCKAAVAWGAKEPLSIEDIQVAPPKAHEVRVKVDWSAVCHTDAYTLSGVDPE 60

Query: 213 GVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQ 392
           G FP+VL                +V+PGDHV+ LY P+C  CKFC + KTNLC K+R TQ
Sbjct: 61  GAFPIVLGHEGAGIVESIGEGVINVRPGDHVILLYTPECKECKFCRSGKTNLCSKIRETQ 120

Query: 393 GQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPT 572
           G+G+MPDGT RF C+ + L H+MGCS+FSQYTVV +ISL  ++ +APL  +CLLGCGV T
Sbjct: 121 GRGLMPDGTSRFSCRDKTLLHYMGCSSFSQYTVVADISLVAISHSAPLRSICLLGCGVTT 180

Query: 573 GYGAALNTAKVEPGSNCA 626
           G+GA  ++AKVE GS  A
Sbjct: 181 GFGAVTHSAKVESGSTVA 198


>SPCC13B11.01 |adh1|adh|alcohol dehydrogenase
           Adh1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 350

 Score = 57.6 bits (133), Expect = 1e-09
 Identities = 42/130 (32%), Positives = 56/130 (43%), Gaps = 4/130 (3%)
 Frame = +3

Query: 57  KCLAAVAWEAGKPLSI--EEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDP-EGVFPV 227
           K LAAV    G P ++  EE+ V  P   EV V I  TGVCHTD + L G  P     P+
Sbjct: 6   KQLAAVFHTHGGPENVKFEEVPVAEPGQDEVLVNIKYTGVCHTDLHALQGDWPLPAKMPL 65

Query: 228 VLXXXXXXXXXXXXXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGV 404
           +                T +K GD V V      C  C++C+  +  +C  +   Q  G 
Sbjct: 66  IGGHEGAGVVVKVGAGVTRLKIGDRVGVKWMNSSCGNCEYCMKAEETICPHI---QLSGY 122

Query: 405 MPDGTRRFRC 434
             DGT +  C
Sbjct: 123 TVDGTFQHYC 132


>SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 360

 Score = 38.7 bits (86), Expect = 7e-04
 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
 Frame = +3

Query: 138 EVRVKITATGVCHTDA-YTLSGKDPEGVF--PVVLXXXXXXXXXXXXXXXTSVKPGDHVV 308
           +V+V I ATG+C +D  Y   G   + +   P++L               +S+KPGD V 
Sbjct: 31  QVKVAIKATGICGSDVHYWKEGGIGDFILKKPMILGHESAGVVVEVGKGVSSLKPGDPVA 90

Query: 309 PLYVPQCNTCKFCLNPKTNLC 371
                 C  C +C + + NLC
Sbjct: 91  VEPGCVCRLCDYCRSGRYNLC 111


>SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 423

 Score = 35.5 bits (78), Expect = 0.006
 Identities = 38/163 (23%), Positives = 62/163 (38%), Gaps = 6/163 (3%)
 Frame = +3

Query: 63  LAAVAWEAGKPLSIEEIEVDPPKAG---EVRVKITATGVCH-TDAYTLSGKDPEGVFPVV 230
           + A  W+   PL+++  EV  P      +V VK TA  +C  +D++  SG+ P      +
Sbjct: 37  MKACVWDG--PLNVKIAEVPKPTITHPKDVIVKTTACTICSGSDSHIFSGEMPGIEKGAI 94

Query: 231 LXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMP 410
           L                +++ GD VV  +   C  C FC   +   C     ++   V  
Sbjct: 95  LGHESCGIVAEKGDEVNNLEIGDRVVIAFDLACGQCSFCKRHEYAACDTTNDSKLMDV-N 153

Query: 411 DGTRRFRCKG--QELYHFMGCSTFSQYTVVLEISLCKVAEAAP 533
            G+      G  + L    GC          EI+ CK+ +  P
Sbjct: 154 YGSHHSAIFGYTKLLGDVPGCQAEYIRVPFAEINCCKLPDDIP 196


>SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 325

 Score = 31.9 bits (69), Expect = 0.078
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 96  LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVL 233
           + I+ + +  PK GE+ VKI A  +  +D    +G  P  V+P ++
Sbjct: 23  IEIQSVPIPQPKNGELLVKIEAAAINPSDLMNATGGFPYTVYPRIV 68


>SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 1250

 Score = 27.1 bits (57), Expect = 2.2
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +3

Query: 294  GDHVVPLY-VPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQEL 449
            G HVV L  V   N C   +  KT    KV   +   + P G+R++ C G  L
Sbjct: 1036 GKHVVRLLQVRDANGCAASIT-KTQPAAKVSVVEMASLAPLGSRQYYCVGDRL 1087


>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
            pombe|chr 3|||Manual
          Length = 1502

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 507  LCKVAEAAPLDKVCLLGCGVPTGY 578
            +CKV E A L   CLL C   T +
Sbjct: 979  ICKVREIASLSLTCLLDCSKMTTF 1002


>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1024

 Score = 25.8 bits (54), Expect = 5.1
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -1

Query: 624 RNLILVQLWQYSRRLHNL*VHRIPANKLYLMEQPLQLYREKFLEQLC 484
           R+L  V   +   R H L +H++   K +  +Q ++  R+  L+ LC
Sbjct: 210 RDLDAVACHERIARYHILCIHQLCEKKQFSAQQEVEQLRKGILQSLC 256


>SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein
           Utp5|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 666

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 57  KCLAAVAWEAGKPL-SIEEIEVDPPKAGEVRVKITATG 167
           K ++ +AWE  KPL + E+I  D   +GE+ V  T +G
Sbjct: 63  KVISCIAWEQ-KPLYASEQITTDISGSGEILVLGTNSG 99


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,640,799
Number of Sequences: 5004
Number of extensions: 53305
Number of successful extensions: 137
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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