BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10l09f (627 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 283 1e-76 AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 283 1e-76 AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 277 4e-75 AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 229 9e-61 Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 48 4e-06 Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 42 3e-04 AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical ... 41 8e-04 Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical pr... 36 0.018 Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical pr... 36 0.024 Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical pr... 31 0.51 AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical ... 29 3.6 Z83119-4|CAE17866.1| 226|Caenorhabditis elegans Hypothetical pr... 28 6.3 Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical pr... 27 8.3 U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 8.3 >U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydrogenase protein. Length = 384 Score = 283 bits (693), Expect = 1e-76 Identities = 130/197 (65%), Positives = 145/197 (73%) Frame = +3 Query: 36 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 215 ST G+VI C AAVAW A PLSIE I+V PPKA EVRVKI T VCHTDAYTL G DPEG Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62 Query: 216 VFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQG 395 +FPVVL T PGDHVVPLYVPQC C++C NPKTNLCQK+R +QG Sbjct: 63 LFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQG 122 Query: 396 QGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTG 575 G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TG Sbjct: 123 NGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTG 182 Query: 576 YGAALNTAKVEPGSNCA 626 YGA LNT KVE GS A Sbjct: 183 YGAVLNTCKVEEGSTVA 199 >AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical protein H24K24.3a protein. Length = 384 Score = 283 bits (693), Expect = 1e-76 Identities = 130/197 (65%), Positives = 145/197 (73%) Frame = +3 Query: 36 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 215 ST G+VI C AAVAW A PLSIE I+V PPKA EVRVKI T VCHTDAYTL G DPEG Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62 Query: 216 VFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQG 395 +FPVVL T PGDHVVPLYVPQC C++C NPKTNLCQK+R +QG Sbjct: 63 LFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQG 122 Query: 396 QGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTG 575 G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TG Sbjct: 123 NGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTG 182 Query: 576 YGAALNTAKVEPGSNCA 626 YGA LNT KVE GS A Sbjct: 183 YGAVLNTCKVEEGSTVA 199 >AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical protein H24K24.3b protein. Length = 386 Score = 277 bits (680), Expect = 4e-75 Identities = 130/199 (65%), Positives = 145/199 (72%), Gaps = 2/199 (1%) Frame = +3 Query: 36 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVK--ITATGVCHTDAYTLSGKDP 209 ST G+VI C AAVAW A PLSIE I+V PPKA EVRVK I T VCHTDAYTL G DP Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKFQILYTAVCHTDAYTLDGHDP 62 Query: 210 EGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRST 389 EG+FPVVL T PGDHVVPLYVPQC C++C NPKTNLCQK+R + Sbjct: 63 EGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRIS 122 Query: 390 QGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVP 569 QG G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ Sbjct: 123 QGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGIS 182 Query: 570 TGYGAALNTAKVEPGSNCA 626 TGYGA LNT KVE GS A Sbjct: 183 TGYGAVLNTCKVEEGSTVA 201 >AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical protein Y50D4C.2 protein. Length = 554 Score = 229 bits (561), Expect = 9e-61 Identities = 102/158 (64%), Positives = 115/158 (72%) Frame = +3 Query: 153 ITATGVCHTDAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCN 332 I T VCHTDAYTL G DPEG+FPVVL T PGDHVVPLYVPQC Sbjct: 215 ILYTSVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGKGVTGFAPGDHVVPLYVPQCK 274 Query: 333 TCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLC 512 C++C NPKTN+CQK+R +QG G MPDGT RF C G++L+HFMGCSTFS+YTVV +ISLC Sbjct: 275 ECEYCKNPKTNMCQKIRVSQGDGFMPDGTSRFTCNGKQLFHFMGCSTFSEYTVVADISLC 334 Query: 513 KVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCA 626 KV APL+KV LLGCG+ TGYGA LNT KVE GS A Sbjct: 335 KVNPQAPLEKVSLLGCGISTGYGAVLNTCKVEEGSTVA 372 Score = 27.5 bits (58), Expect = 8.3 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +1 Query: 55 LSAWPQSRGKQASRCPSRRLKWTRQKPVKCALR 153 + A P S G Q +R KW +KP K AL+ Sbjct: 181 IPARPPSPGAQKLHSRLKRSKWLHRKPTKFALK 213 >Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical protein K12G11.4 protein. Length = 351 Score = 48.4 bits (110), Expect = 4e-06 Identities = 42/178 (23%), Positives = 67/178 (37%), Gaps = 2/178 (1%) Frame = +3 Query: 87 GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK-DPEGVFPVVLXXXXXXXXXX 263 G PL + ++ V P+ E+ VKI +G+CH+D +T G + + P++ Sbjct: 19 GGPLEVRQVSVPQPQENELLVKIEYSGICHSDLHTWEGDFEYASICPLIGGHEGAGTVVT 78 Query: 264 XXXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKG 440 GD + L C C++C LC + Q G+ G Sbjct: 79 IGSKVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLCDHI---QNYGIDRHG-------- 127 Query: 441 QELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPG 614 TF +Y + +I KV+ L + CG T Y +L V+PG Sbjct: 128 ----------TFQEYLTIRDIDAIKVSNDTNLAAAAPVLCGGVTAY-KSLKATNVKPG 174 >Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical protein K12G11.3 protein. Length = 349 Score = 42.3 bits (95), Expect = 3e-04 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 3/101 (2%) Frame = +3 Query: 93 PLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG--KDPEGVFPVVLXXXXXXXXXXX 266 PL + ++ V P E+ VKI +G+CH+D + G KD V P+V Sbjct: 20 PLEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKD-MSVCPLVGGHEGAGSVVQI 78 Query: 267 XXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRS 386 T + GD V L C C+FC LC +++ Sbjct: 79 GKNVTGWQLGDKAGVKLMNFNCLNCEFCKKGHEPLCHHIQN 119 >AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical protein D2063.1 protein. Length = 326 Score = 40.7 bits (91), Expect = 8e-04 Identities = 42/191 (21%), Positives = 78/191 (40%), Gaps = 3/191 (1%) Frame = +3 Query: 51 VIKCLAAVAWEA-GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK-DPEGVFP 224 V K A+ +E+ G PL I+++ + P E+ VK+ +G+CH+D +T G P Sbjct: 6 VPKTQRALIFESYGGPLEIKQLPIPQPNEDELLVKMEYSGICHSDVHTWLGDFHYVSKCP 65 Query: 225 VVLXXXXXXXXXXXXXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQG 401 ++ + + GD V + L C C++C LC V + Sbjct: 66 MIGGHEGAGSVISVGSKVKNWQIGDKVGIKLVQGNCLNCEYCQTGHEPLCPHVWNI---- 121 Query: 402 VMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYG 581 G +++ TF +Y + ++ K+ ++ + + CG T Y Sbjct: 122 ----GVQKY-------------GTFQEYATIRDVDAIKIPKSMNMAAAAPVLCGGVTAY- 163 Query: 582 AALNTAKVEPG 614 AL ++V+ G Sbjct: 164 KALKESEVKSG 174 >Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical protein R04B5.5 protein. Length = 347 Score = 36.3 bits (80), Expect = 0.018 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 3/99 (3%) Frame = +3 Query: 96 LSIEEIEVDPPKAGEVRVKITATGVCHTDA--YTLSGKDPEGV-FPVVLXXXXXXXXXXX 266 L +E++ + P +V VK+ G+C +D +T P V P+++ Sbjct: 16 LRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIVGHETSGIVSEV 75 Query: 267 XXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVR 383 +K GD + C C+ C + NLC ++R Sbjct: 76 GNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMR 114 >Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical protein R04B5.6 protein. Length = 347 Score = 35.9 bits (79), Expect = 0.024 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 4/100 (4%) Frame = +3 Query: 96 LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVF----PVVLXXXXXXXXXX 263 L +E+ + P +V VKI G+C +D + L+ G F P+VL Sbjct: 16 LRLEQAPISKPGPRQVLVKINTVGICGSDVHFLT-HGAIGSFVVKEPMVLGHESSGVVSE 74 Query: 264 XXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVR 383 K GD + C C+ C + NLC +R Sbjct: 75 IGSEVKGFKVGDRIAMEPGLPCKLCEHCKIGRYNLCPDMR 114 >Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical protein F26A3.6 protein. Length = 487 Score = 31.5 bits (68), Expect = 0.51 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +3 Query: 63 LAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAY 188 L A+ + + PL E I DP + +++T T VC DAY Sbjct: 284 LVAMRYCSCHPLMAELIHYDPSSYRDFLLRVTQTSVCSVDAY 325 >AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical protein Y60A3A.14 protein. Length = 362 Score = 28.7 bits (61), Expect = 3.6 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = -2 Query: 452 VEFLSFTAESPSAIWHHTLTL 390 V+ F+AE+ + WHHT++L Sbjct: 157 VQIFRFSAENSTGFWHHTISL 177 >Z83119-4|CAE17866.1| 226|Caenorhabditis elegans Hypothetical protein R05H10.7 protein. Length = 226 Score = 27.9 bits (59), Expect = 6.3 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Frame = +3 Query: 21 SSAVMSTVGKVIKCLAAVAWEA-GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLS 197 S+ V + G+++ CL AW+ + + EVD + I CH D + L+ Sbjct: 60 STVVTTQSGEIVACLVNSAWKRDDNAVEGADYEVDEGLTENMTAFIKMLNTCHEDFWNLA 119 >Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical protein F39B2.3 protein. Length = 328 Score = 27.5 bits (58), Expect = 8.3 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = +3 Query: 66 AAVAWEAGKPLSIEEIEVDPPK--AGEVRVKITATGVCHTDAYTLSGK 203 AAV G P IE +E D P+ +V V+ A GV D Y +G+ Sbjct: 12 AAVVRRFGAPDVIEAVESDMPRLEKNQVLVRNYAAGVNPVDTYIRAGQ 59 >U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical protein T19D12.1 protein. Length = 1844 Score = 27.5 bits (58), Expect = 8.3 Identities = 20/65 (30%), Positives = 30/65 (46%) Frame = -3 Query: 223 GNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPASHATAAKHLITLP 44 G++ G+ SV +S + T T+P+ STS SS +P+S A + P Sbjct: 1533 GSSTVGATQTSVSSSTVPNTGSTGSTVTNPSTSSSTSGSSSTQSIPSSTAANTGSSTSGP 1592 Query: 43 TVDMT 29 TV T Sbjct: 1593 TVATT 1597 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,143,543 Number of Sequences: 27780 Number of extensions: 322653 Number of successful extensions: 836 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 804 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 833 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1374536540 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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