BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10l08r (740 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL132865-19|CAJ76951.1| 220|Caenorhabditis elegans Hypothetical... 33 0.21 Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 31 0.65 Z81476-4|CAB03923.1| 707|Caenorhabditis elegans Hypothetical pr... 30 1.5 Z46934-1|CAA87039.1| 226|Caenorhabditis elegans Hypothetical pr... 28 8.0 AF016679-2|AAB66159.1| 658|Caenorhabditis elegans Hypothetical ... 28 8.0 >AL132865-19|CAJ76951.1| 220|Caenorhabditis elegans Hypothetical protein Y62E10A.20 protein. Length = 220 Score = 33.1 bits (72), Expect = 0.21 Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 2/102 (1%) Frame = -1 Query: 638 LMEFPPIMWPSF--IKYVKNWMFSNFIIRPYFDQEFSLNEFIEASKHAVQIVSGALQNSD 465 + + P + P+F + V N +F Y ++ F++ + + + +S L + Sbjct: 39 VFDTPQVSVPTFELSRRVGNLFAQSFYTLCY-EKSFTVESLVHGANKGIHSLSHFLADEK 97 Query: 464 FKTLEGLVDKDAINALKTAVSQLSVSQRQLLAIEKEDIFYAF 339 + +E L KDA+ ++ A LS L +DI +F Sbjct: 98 WDQMENLAVKDAVENMREARKGLSKQLENALRFSPDDILLSF 139 >Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical protein R10D12.10 protein. Length = 497 Score = 31.5 bits (68), Expect = 0.65 Identities = 22/114 (19%), Positives = 50/114 (43%), Gaps = 8/114 (7%) Frame = -1 Query: 443 VDKDAINALKTAVSQLSVSQRQLLAIEKEDIFYAFPYQVGVIFDDSDKRWVEIT---MCY 273 ++KD + AL+ + + ++ L+ + + +G+I D ++ + T + Sbjct: 69 IEKDVLEALRDSPHSAHIIEQLLIGDYRFTVMTLSGPTLGIIKHIMDNKFSDSTILRLSM 128 Query: 272 HVLRGLKNMKESG----DMPPITLGAQP-QYQDNIFILNYRFIREFTKGVEDSW 126 L +K++ E G D+ P + P + NI +L++ R+F + W Sbjct: 129 RTLMAIKDLHEHGFIHRDLEPFNIALSPYKSSRNILLLDFGEARQFARNDNGKW 182 >Z81476-4|CAB03923.1| 707|Caenorhabditis elegans Hypothetical protein C25F9.5 protein. Length = 707 Score = 30.3 bits (65), Expect = 1.5 Identities = 18/74 (24%), Positives = 32/74 (43%) Frame = -1 Query: 737 NNVQKQIAITSKCPIIQYRKYSEQGTETRKLPQLMEFPPIMWPSFIKYVKNWMFSNFIIR 558 NN+++++ + S Y + K +F MW S + Y K + + NF I Sbjct: 399 NNIEQKLHLLSTTKY--YFTLMTSAIKASKANDCCQFSNDMWESIVSYTKEFFYKNFEI- 455 Query: 557 PYFDQEFSLNEFIE 516 + ++ SL E E Sbjct: 456 -WLKEDESLEEMYE 468 >Z46934-1|CAA87039.1| 226|Caenorhabditis elegans Hypothetical protein ZK1320.1 protein. Length = 226 Score = 27.9 bits (59), Expect = 8.0 Identities = 15/51 (29%), Positives = 24/51 (47%) Frame = -1 Query: 356 DIFYAFPYQVGVIFDDSDKRWVEITMCYHVLRGLKNMKESGDMPPITLGAQ 204 D+ + Y +F + +W +T+ Y MKESG+ PP L A+ Sbjct: 12 DVISPYSYIAFEVFQKLETQWKGVTIRYIPFFLGAVMKESGNRPPAMLPAR 62 >AF016679-2|AAB66159.1| 658|Caenorhabditis elegans Hypothetical protein T28C12.4a protein. Length = 658 Score = 27.9 bits (59), Expect = 8.0 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 Query: 181 NMLSWYWG*APKVIGGMSPLSFIFFSP 261 N+ +WY+ P+ GG SPL F FSP Sbjct: 10 NLPAWYYLKGPR-FGGESPLPFCQFSP 35 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,952,354 Number of Sequences: 27780 Number of extensions: 367424 Number of successful extensions: 922 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 902 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 922 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1745954468 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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