Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l08f
         (615 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0624 + 4651995-4654715                                           30   1.7  
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533...    29   2.9  
04_04_0557 + 26227263-26227707,26228179-26228342,26228432-262285...    28   5.1  
11_06_0460 + 23836034-23836083,23836175-23836318,23836397-238364...    27   8.9  
07_03_1262 - 25273421-25273909,25273966-25274211                       27   8.9  

>07_01_0624 + 4651995-4654715
          Length = 906

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 423 LQNSDFKTLEGLVDKDAINALKTAVSQLSVSQRQLLAIEKEDIFYAFPYQVG 578
           L  SDF  L+  + + A++     V +  + Q +L A E EDI   + Y VG
Sbjct: 45  LLQSDFSMLQAFIAQVAVDRSNDMVLEAWMEQVRLAAHEAEDIVDEYTYLVG 96


>03_06_0531 +
           34552206-34552598,34552665-34552735,34553363-34553369,
           34553603-34553736,34553834-34554245,34554655-34554753,
           34555059-34555283,34555652-34556029,34556412-34556555,
           34556832-34556927,34557228-34557547,34557965-34558040
          Length = 784

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +3

Query: 492 AVSQLSVSQRQLLAIEKEDIFYAFPYQVGVIFDDSD 599
           A+++L + ++ +  +EK  I + FP QV V+  DS+
Sbjct: 105 AIARLGLPEQLVSTLEKRGITHLFPIQVSVLGGDSE 140


>04_04_0557 +
           26227263-26227707,26228179-26228342,26228432-26228529,
           26228620-26228754,26228842-26229031,26229117-26230223
          Length = 712

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 139 YGYAIKSLIIMYKNK 183
           +GY IK  I+MYKNK
Sbjct: 364 FGYTIKGFIVMYKNK 378


>11_06_0460 +
           23836034-23836083,23836175-23836318,23836397-23836480,
           23836695-23836838,23836928-23836978,23837070-23837150,
           23837366-23837509,23837599-23837649,23837738-23838056,
           23839994-23840062,23840378-23840698,23841218-23841583,
           23842241-23842304,23842569-23842690
          Length = 669

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 20/61 (32%), Positives = 30/61 (49%)
 Frame = -2

Query: 500 RHSSLQCINSIFIHQTL*SFEITVL*CS*NNLNCMFGSFNELVQTKFLIKIRSYNKI*KH 321
           R+ + + IN  FI   +   EIT L C   N++C     +E +Q K  I     N++ KH
Sbjct: 581 RNETAREINE-FIMNMIEGEEITYLSCDTYNIDCATTYSSERLQFKITIYNNGLNRL-KH 638

Query: 320 P 318
           P
Sbjct: 639 P 639


>07_03_1262 - 25273421-25273909,25273966-25274211
          Length = 244

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 254 VASIDGIPADNVAFIHKIRKELDVFKFYY 340
           VASI G PAD  AF+  +  ++D    ++
Sbjct: 32  VASISGSPADEAAFVAALAADIDKIDSFF 60


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,587,327
Number of Sequences: 37544
Number of extensions: 265672
Number of successful extensions: 559
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)