Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l08f
         (615 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070543-1|AAL48014.1|  263|Drosophila melanogaster LD24657p pro...   134   1e-31
AE013599-4001|AAF47306.1|  263|Drosophila melanogaster CG3776-PA...   134   1e-31
AE013599-1884|AAS64854.1|  200|Drosophila melanogaster CG30067-P...    29   5.0  

>AY070543-1|AAL48014.1|  263|Drosophila melanogaster LD24657p
           protein.
          Length = 263

 Score =  134 bits (323), Expect = 1e-31
 Identities = 63/141 (44%), Positives = 93/141 (65%), Gaps = 4/141 (2%)
 Frame = +3

Query: 204 PIIQYRKYSEQGTETRKLPQLMEFPPIMWPSFIKYVKNWMFSNFIIRPYFDQEFSLNEFI 383
           P  Q +K         +LP+LM+FP I+WPS +  +KNW+   FIIRPYFD EF L +FI
Sbjct: 51  PQEQDKKEQNARESLNRLPRLMDFPEIVWPSALNSLKNWITIQFIIRPYFDSEFQLKDFI 110

Query: 384 EASKHAVQIVSGALQNSDFKTLEGLVDKDAINALKTAVSQLSVSQRQLLAIEKEDIFYAF 563
             +K A+Q+VS  L   D  +L+ LV  +AI  L+  + +LS++QR+ L I++ DI+ +F
Sbjct: 111 YGAKQALQVVSSKLMGGDLDSLDNLVSPEAIAELRPVIQKLSMTQRRQLEIKESDIYLSF 170

Query: 564 PYQVGVIFDDSD----KRWVE 614
           PYQVG++FDD++    KR+VE
Sbjct: 171 PYQVGIMFDDANDKLQKRFVE 191


>AE013599-4001|AAF47306.1|  263|Drosophila melanogaster CG3776-PA
           protein.
          Length = 263

 Score =  134 bits (323), Expect = 1e-31
 Identities = 63/141 (44%), Positives = 93/141 (65%), Gaps = 4/141 (2%)
 Frame = +3

Query: 204 PIIQYRKYSEQGTETRKLPQLMEFPPIMWPSFIKYVKNWMFSNFIIRPYFDQEFSLNEFI 383
           P  Q +K         +LP+LM+FP I+WPS +  +KNW+   FIIRPYFD EF L +FI
Sbjct: 51  PQEQDKKEQNARESLNRLPRLMDFPEIVWPSALNSLKNWITIQFIIRPYFDSEFQLKDFI 110

Query: 384 EASKHAVQIVSGALQNSDFKTLEGLVDKDAINALKTAVSQLSVSQRQLLAIEKEDIFYAF 563
             +K A+Q+VS  L   D  +L+ LV  +AI  L+  + +LS++QR+ L I++ DI+ +F
Sbjct: 111 YGAKQALQVVSSKLMGGDLDSLDNLVSPEAIAELRPVIQKLSMTQRRQLEIKESDIYLSF 170

Query: 564 PYQVGVIFDDSD----KRWVE 614
           PYQVG++FDD++    KR+VE
Sbjct: 171 PYQVGIMFDDANDKLQKRFVE 191


>AE013599-1884|AAS64854.1|  200|Drosophila melanogaster CG30067-PB,
           isoform B protein.
          Length = 200

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
 Frame = +3

Query: 327 SNFIIRPYFDQEFSLNEFIEASKHAVQIVSGALQN--SDFKTLEGLVDKDA--INALKTA 494
           +NF+I+   D +F+ +  ++ ++     V   L+   S+  T++      A     +++ 
Sbjct: 74  ANFLIKCRLDCDFNASSVLQGNRLIQAKVRPMLERAFSNEPTIDAYESNFAKCSTVVRSK 133

Query: 495 VSQLSVSQRQLLAIEKEDIFYAFPYQVGVIFDDSDKRW 608
             +LS   RQ  A ++  +FY+      +IF   DK W
Sbjct: 134 YQELSPLSRQSDACDRHALFYSLCAYARLIFTCPDKMW 171


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,702,619
Number of Sequences: 53049
Number of extensions: 498290
Number of successful extensions: 1281
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)