BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10l08f (615 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 0.78 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 0.78 EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 23 1.8 EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 23 1.8 AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 5.5 AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 5.5 AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 22 5.5 DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 7.2 DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 7.2 DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 7.2 DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 7.2 DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.2 DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.2 DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 9.6 DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 9.6 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 24.6 bits (51), Expect = 0.78 Identities = 8/30 (26%), Positives = 16/30 (53%) Frame = +3 Query: 156 IAYNNVQKQIAITSKCPIIQYRKYSEQGTE 245 +A + + + CP +YR Y++ G+E Sbjct: 249 VAQDESTSLVCVAQACPTPEYRWYAQTGSE 278 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 24.6 bits (51), Expect = 0.78 Identities = 8/30 (26%), Positives = 16/30 (53%) Frame = +3 Query: 156 IAYNNVQKQIAITSKCPIIQYRKYSEQGTE 245 +A + + + CP +YR Y++ G+E Sbjct: 249 VAQDESTSLVCVAQACPTPEYRWYAQTGSE 278 >EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. Length = 684 Score = 23.4 bits (48), Expect = 1.8 Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = -1 Query: 600 YPNHQKLLQLDKEMHKIYLLFLW-LTIAAGTQKV 502 Y +H KL+++ +++ Y + W L + +G K+ Sbjct: 524 YDSHHKLIEIPEDLKYFYEIDNWMLDLNSGLNKI 557 >EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. Length = 684 Score = 23.4 bits (48), Expect = 1.8 Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = -1 Query: 600 YPNHQKLLQLDKEMHKIYLLFLW-LTIAAGTQKV 502 Y +H KL+++ +++ Y + W L + +G K+ Sbjct: 524 YDSHHKLIEIPEDLKYFYEIDNWMLDLNSGLNKI 557 >AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein protein. Length = 427 Score = 21.8 bits (44), Expect = 5.5 Identities = 6/9 (66%), Positives = 9/9 (100%) Frame = -2 Query: 563 KCIKYIFFF 537 KC++Y+FFF Sbjct: 397 KCLEYLFFF 405 >AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein protein. Length = 427 Score = 21.8 bits (44), Expect = 5.5 Identities = 6/9 (66%), Positives = 9/9 (100%) Frame = -2 Query: 563 KCIKYIFFF 537 KC++Y+FFF Sbjct: 397 KCLEYLFFF 405 >AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. Length = 247 Score = 21.8 bits (44), Expect = 5.5 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = -1 Query: 57 KRYSLNQNNLTTFE 16 K Y +N NN+T F+ Sbjct: 154 KEYQMNGNNITNFK 167 >DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 21.4 bits (43), Expect = 7.2 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = -1 Query: 105 NSYFANNYQNIIQSK*KRYSLN 40 N+Y NNY N K + Y++N Sbjct: 95 NNYNNNNYNNNNYKKLQYYNIN 116 >DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 21.4 bits (43), Expect = 7.2 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = -1 Query: 105 NSYFANNYQNIIQSK*KRYSLN 40 N+Y NNY N K + Y++N Sbjct: 95 NNYNNNNYNNNNYKKLQYYNIN 116 >DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 21.4 bits (43), Expect = 7.2 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = -1 Query: 105 NSYFANNYQNIIQSK*KRYSLN 40 N+Y NNY N K + Y++N Sbjct: 95 NNYNNNNYNNNNYKKLQYYNIN 116 >DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 21.4 bits (43), Expect = 7.2 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = -1 Query: 105 NSYFANNYQNIIQSK*KRYSLN 40 N+Y NNY N K + Y++N Sbjct: 95 NNYNNNNYNNNNYKKLQYYNIN 116 >DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 21.4 bits (43), Expect = 7.2 Identities = 8/17 (47%), Positives = 13/17 (76%) Frame = -2 Query: 602 LIRIIKNYSNLIRKCIK 552 L+R + N S+++R CIK Sbjct: 43 LVRPVVNTSDVLRVCIK 59 >DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 21.4 bits (43), Expect = 7.2 Identities = 8/17 (47%), Positives = 13/17 (76%) Frame = -2 Query: 602 LIRIIKNYSNLIRKCIK 552 L+R + N S+++R CIK Sbjct: 43 LVRPVVNTSDVLRVCIK 59 >DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 21.0 bits (42), Expect = 9.6 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 Query: 105 NSYFANNYQNIIQSK*KRYSLNQNN 31 N+Y +NY N + Y+ N NN Sbjct: 87 NNYKYSNYNNYNNNYNNNYNNNYNN 111 >DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 21.0 bits (42), Expect = 9.6 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 Query: 105 NSYFANNYQNIIQSK*KRYSLNQNN 31 N+Y +NY N + Y+ N NN Sbjct: 87 NNYKYSNYNNYNNNYNNNYNNNYNN 111 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 172,660 Number of Sequences: 438 Number of extensions: 3690 Number of successful extensions: 17 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 17 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 18215697 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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