Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l05r
         (380 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   5.0  
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    22   6.6  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    22   8.7  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    22   8.7  
AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450 CY...    22   8.7  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 235 YNRRQLFKKQIFFNYSRAVCHMLLVLQQT-FSRLPIL 342
           YN R++ K+Q F    R     + +L+ T + RL ++
Sbjct: 71  YNHRKMPKRQAFLGCVRIAASSIQLLRDTGYQRLDLV 107


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 269 FLTIHVLSVICCWYCNKPF 325
           F  +   + I CW  NKPF
Sbjct: 322 FFALIQQNAILCWDSNKPF 340


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/37 (21%), Positives = 19/37 (51%)
 Frame = +2

Query: 227 LSRITVANCSRNKFFLTIHVLSVICCWYCNKPFLDCQ 337
           +  +++  C R  FFLT  V++    ++ +  ++  Q
Sbjct: 51  IGTVSLTLCERAYFFLTFLVVTACSIYFISNVYIKWQ 87


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/37 (21%), Positives = 19/37 (51%)
 Frame = +2

Query: 227 LSRITVANCSRNKFFLTIHVLSVICCWYCNKPFLDCQ 337
           +  +++  C R  FFLT  V++    ++ +  ++  Q
Sbjct: 51  IGTVSLTLCERAYFFLTFLVVTACSIYFISNVYIKWQ 87


>AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 531

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 145 EMVLFIIVIAATYYYMVL 198
           E VL + ++A  YYY+V+
Sbjct: 13  EGVLLVALLALLYYYVVV 30


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,864
Number of Sequences: 2352
Number of extensions: 6556
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29074284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)