Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l05f
         (434 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084118-1|AAL89856.1|  285|Drosophila melanogaster AT13439p pro...    27   8.3  
AY071479-1|AAL49101.1|  160|Drosophila melanogaster RE55080p pro...    27   8.3  
AE014297-777|AAF54261.1|  160|Drosophila melanogaster CG11753-PA...    27   8.3  
AE013599-1050|AAF58822.2|  285|Drosophila melanogaster CG12209-P...    27   8.3  

>AY084118-1|AAL89856.1|  285|Drosophila melanogaster AT13439p
           protein.
          Length = 285

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
 Frame = -1

Query: 260 RNSDNLMNEMVLF---IIVIAATYYYMVLFRFIVN 165
           R +D+L+  ++LF   II+   T+Y  +++RF  N
Sbjct: 201 RLNDHLLASLILFHDFIIIFLLTFYAQIIYRFASN 235


>AY071479-1|AAL49101.1|  160|Drosophila melanogaster RE55080p
           protein.
          Length = 160

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 115 FFLTIHVLSVICCWYCNKPF 56
           F  T HVL ++ CW+ N+ F
Sbjct: 95  FSCTFHVLHLLICWWYNRSF 114


>AE014297-777|AAF54261.1|  160|Drosophila melanogaster CG11753-PA
           protein.
          Length = 160

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 115 FFLTIHVLSVICCWYCNKPF 56
           F  T HVL ++ CW+ N+ F
Sbjct: 95  FSCTFHVLHLLICWWYNRSF 114


>AE013599-1050|AAF58822.2|  285|Drosophila melanogaster CG12209-PA
           protein.
          Length = 285

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
 Frame = -1

Query: 260 RNSDNLMNEMVLF---IIVIAATYYYMVLFRFIVN 165
           R +D+L+  ++LF   II+   T+Y  +++RF  N
Sbjct: 201 RLNDHLLASLILFHDFIIIFLLTFYAQIIYRFASN 235


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,724,929
Number of Sequences: 53049
Number of extensions: 289102
Number of successful extensions: 551
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)