Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l03r
         (777 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0100 - 26424769-26425545,26425666-26425697,26425778-264258...    29   5.4  
09_06_0128 + 21026454-21026909                                         28   7.2  

>01_06_0100 -
           26424769-26425545,26425666-26425697,26425778-26425894,
           26426067-26426118,26426229-26426281,26426883-26427585
          Length = 577

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/48 (29%), Positives = 28/48 (58%)
 Frame = -1

Query: 621 VKKVLSHQVKNLMKRNLPKTTMKKKKVLNPNQLKNHTKKNIVRKPTMK 478
           +KK ++ +    M+R + K TM K+++     +K  T+K  +++ TMK
Sbjct: 376 MKKKMTMKRMMTMRRKM-KRTMMKRRMRKRTTMKRRTRKRTMKRRTMK 422


>09_06_0128 + 21026454-21026909
          Length = 151

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -1

Query: 630 KRKVKKVLSHQVKNLMKRNLPKTTMKKKKVLNPNQLKNHTK 508
           +RK+K ++  ++K + K+  PK  MKK K     Q K  TK
Sbjct: 3   RRKMKAMVKRKMKAMGKKK-PKVPMKKTKAQRKKQPKASTK 42


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,639,047
Number of Sequences: 37544
Number of extensions: 216742
Number of successful extensions: 620
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)