Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l03r
         (777 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    26   1.5  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    24   6.0  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    24   6.0  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   6.0  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   8.0  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   8.0  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 12/51 (23%), Positives = 27/51 (52%)
 Frame = -1

Query: 666 RIIMPQS*KSIMKRKVKKVLSHQVKNLMKRNLPKTTMKKKKVLNPNQLKNH 514
           ++ +P+S K +  +     +S  V+  + R LPK  + ++   +P+ L +H
Sbjct: 304 KVSIPKSLKDLALQSTIWPVSLTVREFVDRGLPKQRIHERARFDPSALTSH 354


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 205 LHLLKCVRAFLFRYVHGYVLQRRADSF 285
           + L++    FLFRYV G +L R+  S+
Sbjct: 19  IRLMQASGHFLFRYVTGPILIRKVYSW 45


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 205 LHLLKCVRAFLFRYVHGYVLQRRADSF 285
           + L++    FLFRYV G +L R+  S+
Sbjct: 19  IRLMQASGHFLFRYVTGPILIRKVYSW 45


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 655 HDDSHCVLFWFLPLI 699
           H D H  LFW+ PL+
Sbjct: 279 HSDPHRDLFWWTPLL 293


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 304 VRFLLHVQYAPVR 342
           VR+LLH +Y P R
Sbjct: 429 VRYLLHARYGPAR 441


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 427 IILLRVHCVLREVLQQRLHGGLPHYVFLRV 516
           + LL V C LRE         LP Y+F R+
Sbjct: 74  VTLLLVFCGLREADVCAFDNILPDYIFFRM 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,276
Number of Sequences: 2352
Number of extensions: 9194
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)