Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l03r
         (777 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens ...    30   8.1  

>AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46115 fis, clone TESTI2037085. ).
          Length = 148

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 28/120 (23%), Positives = 42/120 (35%)
 Frame = -1

Query: 633 MKRKVKKVLSHQVKNLMKRNLPKTTMKKKKVLNPNQLKNHTKKNIVRKPTMKSLLKHLTK 454
           MK+K KK    + K   K+   K   KKKK     + K   KK   +K   K   K   K
Sbjct: 1   MKKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60

Query: 453 NTVNP*KNYLLRATNHQAKNTQQKNIT*SHPSMKLFMTHRRILNM*KKPHTKKRNMKRVR 274
                 K    +    + K  ++K         K     RR     ++   ++R  +R R
Sbjct: 61  KKKKKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRRRRRRR 120



 Score = 30.3 bits (65), Expect = 8.1
 Identities = 28/123 (22%), Positives = 43/123 (34%)
 Frame = -1

Query: 642 KSIMKRKVKKVLSHQVKNLMKRNLPKTTMKKKKVLNPNQLKNHTKKNIVRKPTMKSLLKH 463
           K   K+K KK    + K   K+   K   KKKK     + K   KK   +K   K   K 
Sbjct: 3   KKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62

Query: 462 LTKNTVNP*KNYLLRATNHQAKNTQQKNIT*SHPSMKLFMTHRRILNM*KKPHTKKRNMK 283
             KN     K    +    + K  ++K         +     RR     ++   ++R  +
Sbjct: 63  KKKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRRRRRRRRR 122

Query: 282 RVR 274
           R R
Sbjct: 123 RRR 125


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,351,516
Number of Sequences: 237096
Number of extensions: 1245476
Number of successful extensions: 2981
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2865
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)