Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10l02f
(562 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156; Eukar... 287 1e-76
UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25; Euka... 244 8e-64
UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38; Euka... 243 3e-63
UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal ... 217 2e-55
UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, wh... 187 1e-46
UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1; ... 154 1e-36
UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20; Archae... 150 2e-35
UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1; Archaeo... 144 9e-34
UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1; Nanoarc... 136 2e-31
UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga m... 134 1e-30
UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7; Euryarc... 132 7e-30
UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3; Methano... 132 7e-30
UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1; Methanobrev... 130 2e-29
UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6; Methano... 130 3e-29
UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus N... 125 6e-28
UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum ... 122 6e-27
UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2; environm... 120 3e-26
UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4; Thermop... 119 4e-26
UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5; Halobac... 118 9e-26
UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 107 2e-22
UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiell... 104 2e-21
UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n... 80 3e-14
UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187; Bacter... 66 5e-10
UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4; Bacteria... 64 2e-09
UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellula... 64 3e-09
UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victival... 61 2e-08
UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamb... 59 6e-08
UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125; Bacter... 58 1e-07
UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3; Bacteria... 58 1e-07
UniRef50_Q6YR10 Cluster: 50S ribosomal protein L5; n=22; Bacteri... 55 1e-06
UniRef50_Q6AP59 Cluster: 50S ribosomal protein L5; n=77; Bacteri... 53 5e-06
UniRef50_Q6B8W5 Cluster: Chloroplast 50S ribosomal protein L5; n... 52 7e-06
UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellul... 52 9e-06
UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas ... 52 1e-05
UniRef50_Q1ACG2 Cluster: Chloroplast 50S ribosomal protein L5; n... 51 2e-05
UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia... 50 4e-05
UniRef50_A5KRR2 Cluster: 50S ribosomal protein L5; n=1; candidat... 48 1e-04
UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast p... 48 1e-04
UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2; Epsilonp... 48 2e-04
UniRef50_Q2GEC7 Cluster: 50S ribosomal protein L5; n=1; Neoricke... 46 6e-04
UniRef50_P56033 Cluster: 50S ribosomal protein L5; n=6; Bacteria... 46 8e-04
UniRef50_Q6KI43 Cluster: 50S ribosomal protein L5; n=12; Bacteri... 45 0.001
UniRef50_O21252 Cluster: Mitochondrial 60S ribosomal protein L5;... 44 0.002
UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio c... 44 0.003
UniRef50_Q2EEW3 Cluster: Ribosomal protein L5; n=1; Helicosporid... 44 0.003
UniRef50_P49547 Cluster: Chloroplast 50S ribosomal protein L5; n... 43 0.004
UniRef50_A7CZB2 Cluster: Ribosomal protein L5; n=1; Opitutaceae ... 42 0.013
UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole geno... 40 0.030
UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;... 40 0.040
UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep... 37 0.37
UniRef50_Q9G4D4 Cluster: Ribosomal protein L5; n=1; Thraustochyt... 36 0.85
UniRef50_A1RXI7 Cluster: Methyltransferase type 11; n=1; Thermof... 35 1.1
UniRef50_Q5DZU7 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q589Y5 Cluster: Serine protease; n=3; Obtectomera|Rep: ... 34 2.6
UniRef50_Q61E12 Cluster: Putative uncharacterized protein CBG122... 33 3.4
UniRef50_A6D0I6 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6
UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: W... 33 6.0
UniRef50_Q2R3R6 Cluster: Transposon protein, putative, Pong sub-... 33 6.0
UniRef50_A4PID3 Cluster: Chitinase; n=1; Monochamus alternatus|R... 33 6.0
UniRef50_Q1MDG2 Cluster: Conserved hypothetical exported protein... 32 8.0
UniRef50_A7A6S7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.0
UniRef50_A7Q5M3 Cluster: Chromosome undetermined scaffold_53, wh... 32 8.0
UniRef50_Q58718 Cluster: DNA double-strand break repair rad50 AT... 32 8.0
>UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156;
Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens
(Human)
Length = 178
Score = 287 bits (704), Expect = 1e-76
Identities = 133/156 (85%), Positives = 147/156 (94%)
Frame = +3
Query: 93 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 272
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 273 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 452
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 128
Query: 453 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMK 560
DFYVVLGRPGF++A ++R+TG +G HR++KE+AM+
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMR 164
>UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25;
Eukaryota|Rep: 60S ribosomal protein L11-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 174
Score = 244 bits (598), Expect = 8e-64
Identities = 118/156 (75%), Positives = 132/156 (84%)
Frame = +3
Query: 90 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 269
++N MR+L I KL LNI VGESGDRLTRA+KVLEQL+GQ PV SKARYTVR+FGIRRNEK
Sbjct: 5 AQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEK 64
Query: 270 IAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYG 449
IAVH TVRG KAEEILERGLKV+EY+LR NFSATGNFGFGI EHIDLGIKYDPSIGI+G
Sbjct: 65 IAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFG 124
Query: 450 LDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAM 557
+DFYVV+ RPG V R+R G VG H+ TKED +
Sbjct: 125 MDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTV 160
>UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38;
Eukaryota|Rep: 60S ribosomal protein L11-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 182
Score = 243 bits (594), Expect = 3e-63
Identities = 117/155 (75%), Positives = 132/155 (85%)
Frame = +3
Query: 96 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 275
N MR++ ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 9 NPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 68
Query: 276 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 455
+ TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+D
Sbjct: 69 CYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128
Query: 456 FYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMK 560
FYVVL RPG+ VA RRR +VG HR+TK+DAMK
Sbjct: 129 FYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMK 163
>UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal
protein L11; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L11 - Mus musculus
Length = 279
Score = 217 bits (529), Expect = 2e-55
Identities = 99/121 (81%), Positives = 113/121 (93%)
Frame = +3
Query: 198 TGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATG 377
+GQ PV SKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TG
Sbjct: 98 SGQAPVESKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTG 157
Query: 378 NFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAM 557
NFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR GF++A ++R+TG +G HR++KE+AM
Sbjct: 158 NFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRSGFSIADKKRRTGCIGAKHRISKEEAM 217
Query: 558 K 560
+
Sbjct: 218 R 218
>UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 187 bits (456), Expect = 1e-46
Identities = 87/147 (59%), Positives = 111/147 (75%)
Frame = +3
Query: 84 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 263
+ +NVMR + I KL ++IC GESGD+LT+AAKVLE LTGQ+PVF KARYTVRSFGIRRN
Sbjct: 33 ETKENVMRKIRIEKLMVHICAGESGDKLTKAAKVLEDLTGQKPVFGKARYTVRSFGIRRN 92
Query: 264 EKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGI 443
EKI+V CT+RG +A +IL RGL+V+E EL++ NFS +GNFGFGIQEHIDLG+KYDP GI
Sbjct: 93 EKISVFCTIRGDQARDILVRGLRVKEMELKKRNFSESGNFGFGIQEHIDLGLKYDPYTGI 152
Query: 444 YGLDFYVVLGRPGFNVAHRRRKTGKVG 524
+ + + ++ K K+G
Sbjct: 153 FRYGLLCCVVKTRIESCSKKIKKFKIG 179
>UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L5P - Ignicoccus hospitalis KIN4/I
Length = 198
Score = 154 bits (374), Expect = 1e-36
Identities = 71/148 (47%), Positives = 105/148 (70%), Gaps = 1/148 (0%)
Frame = +3
Query: 117 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRG 296
+ K+ +NI +GESG+RL +A +LE+LTGQ+PV KA+ T+R FGIRR E IAV T+RG
Sbjct: 38 LAKVTVNIALGESGERLEKAYNLLEELTGQRPVKRKAKKTIRQFGIRRGENIAVMVTLRG 97
Query: 297 AKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLG 473
+A E L++ L+ ++++ +F GN GFGI+EHI + G +YDP +GI+G+D + +
Sbjct: 98 QRAVEFLKKALEAVGWKIKASSFDEFGNVGFGIREHIQIPGTRYDPRVGIFGMDVILTIE 157
Query: 474 RPGFNVAHRRRKTGKVGFPHRLTKEDAM 557
RPG+ VA RRR K+ HR+TKE++M
Sbjct: 158 RPGYRVARRRRARSKIPRRHRVTKEESM 185
>UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20;
Archaea|Rep: 50S ribosomal protein L5P - Aeropyrum
pernix
Length = 192
Score = 150 bits (364), Expect = 2e-35
Identities = 72/157 (45%), Positives = 106/157 (67%), Gaps = 2/157 (1%)
Frame = +3
Query: 93 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 272
++ MR I K+ +NI +G+SG+RL RAA+VLE+LTGQ+PVF KA+ T+R+FG+R+ E I
Sbjct: 24 RSPMRRPRIVKVTVNISIGQSGERLQRAAEVLEELTGQKPVFRKAKRTIRAFGVRKGENI 83
Query: 273 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYG 449
AV T+RG KA L+R L + ++ + GN FGI+EHI + G+KYDP +GI G
Sbjct: 84 AVMVTLRGEKALNFLKRALDAVGHRIKTSSIDEHGNVSFGIEEHILIPGVKYDPRVGILG 143
Query: 450 LDFYVVLGRPGFNVAHRRR-KTGKVGFPHRLTKEDAM 557
+D + + RPG + RRR + G + HR+T+E+ M
Sbjct: 144 MDVAITIQRPGHRIVERRRQRRGHIPRRHRVTREETM 180
>UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L5P -
Archaeoglobus fulgidus
Length = 178
Score = 144 bits (350), Expect = 9e-34
Identities = 72/158 (45%), Positives = 104/158 (65%), Gaps = 1/158 (0%)
Frame = +3
Query: 90 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 269
++N MR + + K+ +NI VGESG+R +A +LE+L Q+P + A+ T+++FGIR+ E
Sbjct: 12 NENPMREVVLDKVVINIGVGESGERHKKAYSLLEELVEQKPAITYAKMTIKNFGIRKGEA 71
Query: 270 IAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIY 446
I + T+RG KA + L+ L V+E L R + G F FGI EHIDL G+ YDP +GI+
Sbjct: 72 IGIKVTLRGEKALKFLKDALTVKENRLSRKSI-GEGYFAFGIAEHIDLPGVDYDPDVGIF 130
Query: 447 GLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMK 560
G+D V L R G+ VA RRRK K+ HR+TKED ++
Sbjct: 131 GMDVCVSLKRRGYRVARRRRKKAKIATSHRVTKEDTIR 168
>UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L5P -
Nanoarchaeum equitans
Length = 169
Score = 136 bits (330), Expect = 2e-31
Identities = 73/155 (47%), Positives = 105/155 (67%), Gaps = 2/155 (1%)
Frame = +3
Query: 102 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 281
MR + I K+ LNI VGESG++L +A ++L++LTGQ+PV +KA+ V + IR I V
Sbjct: 5 MRKIRIEKVTLNIGVGESGEKLDKAYELLKRLTGQKPVKTKAKVRVEQWHIRPGLPIGVK 64
Query: 282 CTVRGAKAEEIL-ERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLD 455
T+RG KA +IL E+ L +++++ +F+ G FGFGI E+I + G+KYDP +G+ GL+
Sbjct: 65 VTLRGEKAYKILKEKLLPAVDFKIKASSFTDRG-FGFGIPEYIMIPGMKYDPELGLIGLE 123
Query: 456 FYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMK 560
YV L RPG+ V RR K KVG HRL KE+ +K
Sbjct: 124 AYVTLERPGYRVERRRIKRSKVGSRHRLNKEEIIK 158
>UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L5 -
Caldivirga maquilingensis IC-167
Length = 197
Score = 134 bits (324), Expect = 1e-30
Identities = 66/154 (42%), Positives = 102/154 (66%), Gaps = 1/154 (0%)
Frame = +3
Query: 102 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 281
MR + I + +N+ +G+SG+RL +AAKV+ +LTG+ P + A +++ FGIRR E I +
Sbjct: 32 MRRIFIWSVAVNMGIGQSGERLEKAAKVMSELTGRTPSYRLAHKSIKDFGIRRGEPIGLL 91
Query: 282 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 458
T+R +A L R L ++ LR ++F+A GN FGI+EHI + G +YDP++GI+G D
Sbjct: 92 VTLRRNEAVWFLLRALAAVDFTLREESFNA-GNVSFGIREHILVPGSRYDPALGIFGFDV 150
Query: 459 YVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMK 560
V L RPGF V +RRR VG HR+++E+ ++
Sbjct: 151 AVTLARPGFRVQYRRRARADVGKDHRVSREETIR 184
>UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L5P -
Methanococcus maripaludis
Length = 181
Score = 132 bits (318), Expect = 7e-30
Identities = 70/160 (43%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Frame = +3
Query: 93 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 272
K M+ I+K+ +N VGE+GDRLT AKV+E+LTGQ PV + A+ T +FGIR+ I
Sbjct: 9 KEPMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIRKKLPI 68
Query: 273 AVHCTVRGAKAEEILER---GLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIG 440
+ T+RG KAEE L+ K L +F GNF FG+ EHID G KYDPS+G
Sbjct: 69 GLKVTLRGKKAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFPGQKYDPSVG 128
Query: 441 IYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMK 560
IYG+D V + G+ V R+ K + H +TK++A++
Sbjct: 129 IYGMDICVTFEKSGYRVKSRKVKRSHIPEKHLVTKDEAIE 168
>UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 169
Score = 132 bits (318), Expect = 7e-30
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 1/155 (0%)
Frame = +3
Query: 96 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 275
NVMR + K+ +++ VGESG L A ++L +TGQ+ V A+ T+ +F I++NE I
Sbjct: 3 NVMRTPVVEKVIVHMGVGESGQHLVDAEEILRNITGQEVVRCFAKRTLPAFSIKKNEPIG 62
Query: 276 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 452
T+RG +A++ LE L + + L R F + GN FGI+EH D G+KYDP+IG++G+
Sbjct: 63 CKVTLRGQRAQQFLETALGIVDKTLVRSQFDSLGNVSFGIEEHTDFPGMKYDPNIGVFGM 122
Query: 453 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAM 557
D VV+ RPG + RR T K+ HR+T ED++
Sbjct: 123 DVTVVIKRPGERICKRRIATRKIPTNHRVTLEDSI 157
>UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L5p - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 170
Score = 130 bits (315), Expect = 2e-29
Identities = 65/156 (41%), Positives = 100/156 (64%), Gaps = 1/156 (0%)
Frame = +3
Query: 96 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 275
N M + I K ++I VGE+G++L+RA +LEQ+ Q PV + ++ T FGIR+ + IA
Sbjct: 2 NPMNEVQISKATVSIGVGEAGEKLSRAITLLEQMFDQTPVKTFSKVTNPEFGIRKRQPIA 61
Query: 276 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 452
T+RG KA++ +E L+ ++ F A GN FGI+EHID+ G+KY+P IGI+G+
Sbjct: 62 CKLTLRGEKADKAIEMVLEGINKNIKPTQFDAQGNLSFGIKEHIDIPGMKYNPDIGIFGM 121
Query: 453 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMK 560
+ V +PG+ +A RR + KV HR++KE+ MK
Sbjct: 122 NVSVTFEKPGYRIAKRRIQQKKVPAKHRISKEETMK 157
>UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 169
Score = 130 bits (313), Expect = 3e-29
Identities = 64/155 (41%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Frame = +3
Query: 96 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 275
N MR + K+ +++ VGESG L A ++L+ +TGQ+ V A+ T+ +F I++NE I
Sbjct: 3 NPMRTPMVEKVIVHMGVGESGQHLVNAEEILKTITGQEVVRCFAKRTLPAFSIKKNEPIG 62
Query: 276 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 452
T+RG +A+E L ++ E L R F + GN FGI+EH D G++YDP+IG++G+
Sbjct: 63 CKVTLRGQRAQEFLGTSFEIIEKTLSRAQFDSLGNVSFGIEEHTDFPGMRYDPNIGVFGM 122
Query: 453 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAM 557
D VVL RPG + RR T K+ HR+T +DA+
Sbjct: 123 DVTVVLKRPGERICKRRIATRKIPTDHRVTVDDAI 157
>UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 173
Score = 125 bits (302), Expect = 6e-28
Identities = 61/156 (39%), Positives = 99/156 (63%), Gaps = 1/156 (0%)
Frame = +3
Query: 90 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 269
+++ M+ + + K+ LN+ VG+SGD + A++ LEQ++G++P A+ T R +G+R+ E
Sbjct: 5 TESPMKKISLEKVVLNMGVGKSGDVIEIASRALEQISGKKPSARNAKETQRDWGVRKGEP 64
Query: 270 IAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIY 446
I V T+RG A+ +L+R L+ + + F GN+ FGI+EHID+ G+KY+PSIGI
Sbjct: 65 IGVAVTIRGDDAKALLKRLLEAKGNTVNGRAFDNFGNYSFGIREHIDIPGVKYEPSIGIL 124
Query: 447 GLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDA 554
GL V L RPG+ + R + VG H +T ++A
Sbjct: 125 GLGISVTLTRPGYGIRTRSKHKASVGKSHIITSQEA 160
>UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L5 - Cenarchaeum
symbiosum
Length = 169
Score = 122 bits (294), Expect = 6e-27
Identities = 60/152 (39%), Positives = 91/152 (59%), Gaps = 1/152 (0%)
Frame = +3
Query: 102 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 281
MR + + K+ LN+ VG+SG+ + A + L +++G++P A T R FG+R+ E I
Sbjct: 5 MRKITLEKVVLNMGVGQSGNAVEVAKRALGEISGKKPCGRDAHETQRDFGVRKGEPIGAA 64
Query: 282 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 458
T+RG A + R + + +++ +F GNF FGI EHID+ GIKYDP IGI GLD
Sbjct: 65 VTIRGEDAGALARRLFEAKGGQVKGRSFDDFGNFSFGIGEHIDIPGIKYDPGIGILGLDV 124
Query: 459 YVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDA 554
+ L RPG+ + R + +VG HR+T +A
Sbjct: 125 CMTLSRPGYGIRKRSKHKARVGRSHRITATEA 156
>UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2;
environmental samples|Rep: Ribosomal protein L5/L11 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 168
Score = 120 bits (288), Expect = 3e-26
Identities = 67/148 (45%), Positives = 87/148 (58%), Gaps = 2/148 (1%)
Frame = +3
Query: 117 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRG 296
I K+ +NI VGE G RL A +VLE LTG +P+ + +R T R G R I T+R
Sbjct: 6 ITKVTVNIGVGEGGSRLQLAERVLELLTGLKPIRTISRMTNRDLGTRLGAPIGCKVTIRD 65
Query: 297 A-KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGI-KYDPSIGIYGLDFYVVL 470
A K + L+ VRE L NF +GN FGI ++ D KYDP IGIYG+D VVL
Sbjct: 66 ADKVQSFLKDAFWVRENTLPSYNFDQSGNLSFGIADYTDFPAQKYDPDIGIYGMDVNVVL 125
Query: 471 GRPGFNVAHRRRKTGKVGFPHRLTKEDA 554
RPG V+ RRR+ KVG HR+ K+++
Sbjct: 126 ERPGHRVSRRRRRGVKVGVEHRVGKDES 153
>UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L5P -
Picrophilus torridus
Length = 176
Score = 119 bits (287), Expect = 4e-26
Identities = 64/161 (39%), Positives = 96/161 (59%), Gaps = 2/161 (1%)
Frame = +3
Query: 84 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 263
+ ++N MR + I K+ +NI VG +G+RL RAAKVLE LT +P F+ A+ TVR F IR+
Sbjct: 3 ETTENSMREIVIDKVVVNIGVGAAGERLNRAAKVLELLTHHKPAFTSAKRTVRDFNIRKG 62
Query: 264 EKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIG 440
I V T+R A L+ ++Y++ +F GN FGI ++ D G+KYDP IG
Sbjct: 63 LNIGVKVTLRKDDALSFLKEAFYAKDYKIPVYSFDKNGNAYFGISDYTDFKGMKYDPDIG 122
Query: 441 IYGLDFYVVL-GRPGFNVAHRRRKTGKVGFPHRLTKEDAMK 560
I+G+D +V R G+ + RR K + R++KE+ +K
Sbjct: 123 IFGMDIAIVFRRRGGYRIEKRRIKKMHIPKKMRISKEETIK 163
>UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 118 bits (284), Expect = 9e-26
Identities = 64/153 (41%), Positives = 87/153 (56%), Gaps = 1/153 (0%)
Frame = +3
Query: 102 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 281
MR I K+ +++ +G G L A +L ++TGQ PV +KA+ TV F IR + I
Sbjct: 14 MREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAK 73
Query: 282 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 458
T+R AEE L+ L + EL F TGNF FG++EH + +YDPSIGIYGLD
Sbjct: 74 VTLRDEMAEEFLQTALPLA--ELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDV 131
Query: 459 YVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAM 557
V L RPG+ VA R + + + HRL DA+
Sbjct: 132 TVNLVRPGYRVAKRDKASRSIPTKHRLNPADAV 164
>UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 191
Score = 107 bits (257), Expect = 2e-22
Identities = 54/150 (36%), Positives = 89/150 (59%)
Frame = -3
Query: 551 IFLCEAVGKSHFSCLTPSVCYVETWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITR 372
+FL V + F + S TW +V++ ++N++ +VLDTQ++VFL+TE ++T
Sbjct: 21 VFLGSLVRVTDFRLTSLSSGDSGTWSTHDNVEIHTVNTDTWVVLDTQIDVFLDTETEVTG 80
Query: 371 GGEVVTPQFIFSDFQTPLKDFFCFSSSDCTMDSNLFITTDTKRPHCIPSLGKYRLLSCEL 192
EV Q +F D QT +DFF +++ +DSNLF+++DT+ + SLG L+ +L
Sbjct: 81 SREVSVSQLVFLDLQTSFQDFFSLWTTNSNVDSNLFVSSDTESSDSVSSLGLNWSLTRQL 140
Query: 191 LQHLGGTSQPVTGFTNTYVQAKLSDMKIPH 102
Q+LG + Q VT FTN +Q + D++ H
Sbjct: 141 FQNLGSSGQSVTRFTNRNIQDQFLDLQFTH 170
>UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiella
natans|Rep: Ribosomal protein L11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 104 bits (249), Expect = 2e-21
Identities = 48/139 (34%), Positives = 84/139 (60%)
Frame = +3
Query: 102 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 281
M+ + + KL L+I VG SG L +++K+L++++ Q P F A+ T+++F IRR E I+
Sbjct: 1 MKQIFLNKLILSIDVGSSGSNLYKSSKLLKKISLQFPSFGMAKRTIKTFSIRRGEYISCF 60
Query: 282 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 461
C++ K L + LK++ + + NFS T FG GI +H++LG +D IGI+G++
Sbjct: 61 CSLSKKKGILFLYKMLKLKTFTINESNFSLTSTFGIGISDHLELGYNFDQKIGIHGINII 120
Query: 462 VVLGRPGFNVAHRRRKTGK 518
L R G+ + ++ + K
Sbjct: 121 GDLSRRGYRIKLKKEQDPK 139
>UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 363
Score = 80.2 bits (189), Expect = 3e-14
Identities = 45/137 (32%), Positives = 78/137 (56%), Gaps = 1/137 (0%)
Frame = -3
Query: 509 LTPSVCYVETWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDF 330
LTP+V V ++DV++ +++ +VLD +VNVF +TE ++TRG EV +F F
Sbjct: 65 LTPAVDSVAR-ALQHDVEIHTVDPCGRVVLDAEVNVFADTETEVTRGAEVALEEFEFLHL 123
Query: 329 QTPLKDFF-CFSSSDCTMDSNLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTG 153
+ L++ ++ + +LF+T + +R H + LG+ RLL+ +LLQHL + +T
Sbjct: 124 EPALQNLHRLVPVTNGDVRGDLFVTANAERAHGVARLGEDRLLTGQLLQHLRRLREAITA 183
Query: 152 FTNTYVQAKLSDMKIPH 102
N V+ +L + PH
Sbjct: 184 LANANVEHELVNADRPH 200
>UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187;
Bacteria|Rep: 50S ribosomal protein L5 - Pseudomonas
aeruginosa
Length = 179
Score = 66.1 bits (154), Expect = 5e-10
Identities = 46/130 (35%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Frame = +3
Query: 96 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 266
NVM + K+ LN+ +GE+ GD+ + A LE++TGQ+PV + AR ++ F IR
Sbjct: 24 NVMEVPRVTKITLNMGLGEAVGDKKIIENAVADLEKITGQKPVVTYARKSIAGFKIREGW 83
Query: 267 KIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKY 425
I V T+R + E L+R L +VR++ L +F GN+ G++E I I Y
Sbjct: 84 PIGVKVTLRSDRMYEFLDRLLSISLPRVRDFRGLNAKSFDGRGNYSMGVKEQIIFPEIDY 143
Query: 426 DPSIGIYGLD 455
D + GLD
Sbjct: 144 DKIDALRGLD 153
>UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4;
Bacteria|Rep: 50S ribosomal protein L5 - Blochmannia
floridanus
Length = 190
Score = 64.5 bits (150), Expect = 2e-09
Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 10/134 (7%)
Frame = +3
Query: 93 KNVMRNLHIRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 263
K+VM+ I K+ +++ VG+S L RA + LE ++GQ+PV +KAR ++ SF IR+
Sbjct: 23 KSVMQVPKINKITISMGVGKSIINKKFLERAIEDLEMISGQKPVITKARKSIASFKIRQG 82
Query: 264 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIK 422
++I T+R + E ER + ++R++ L +F GN+ GI+E I I
Sbjct: 83 QEIGCKVTLRRKRMWEFFERLISIAIPRIRDFRGLSIKSFDGYGNYTMGIREQIIFPEIN 142
Query: 423 YDPSIGIYGLDFYV 464
YD GI G++ +
Sbjct: 143 YDTIDGIRGMNITI 156
>UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellular
organisms|Rep: 50S ribosomal protein L5 - Thermotoga
maritima
Length = 184
Score = 63.7 bits (148), Expect = 3e-09
Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 10/137 (7%)
Frame = +3
Query: 87 NSKNVMRNLHIRKLCLNICVGESG---DRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIR 257
N KN+ + + K+ +N+ +GE D + R A L ++TGQ+P+ ++AR ++ +F IR
Sbjct: 25 NYKNIHQVPKLVKIVINMGIGEGSRNYDLIERHANELAKITGQKPIVTRARKSISNFKIR 84
Query: 258 RNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-G 416
+ I + T+RGA+ L + + KVR++ L ++F GN+ FG+ E +
Sbjct: 85 KGMPIGLKVTLRGARMYNFLYKLINIVLPKVRDFRGLDPNSFDGRGNYSFGLSEQLVFPE 144
Query: 417 IKYDPSIGIYGLDFYVV 467
+ D I G+D +V
Sbjct: 145 LNPDEVRRIQGMDITIV 161
>UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victivallis
vadensis ATCC BAA-548|Rep: 50S ribosomal protein L5 -
Victivallis vadensis ATCC BAA-548
Length = 178
Score = 60.9 bits (141), Expect = 2e-08
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Frame = +3
Query: 93 KNVMRNLHIRKLCLNICVGESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 266
KNVM+ + K+ ++ +G +R T A K + +TGQ+PV +KAR V +F +R
Sbjct: 23 KNVMQIPKLEKIVISTGIGSDAERDAFTEAKKHIGAMTGQEPVITKARKNVSNFKLRVGM 82
Query: 267 KIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE 401
+ V T+RG++ E L+R + +VR++ + + F GN+ GI +
Sbjct: 83 PVGVMVTLRGSRMYEFLDRFVHNALPRVRDFRGIPKTGFDGVGNYNLGISD 133
>UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_173473_174138 - Giardia lamblia
ATCC 50803
Length = 221
Score = 59.3 bits (137), Expect = 6e-08
Identities = 39/136 (28%), Positives = 67/136 (49%)
Frame = -3
Query: 509 LTPSVCYVETWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDF 330
L P++ E K V+V +I+++ +VLD ++NVF + E +++ GGE QF D
Sbjct: 63 LCPALIDAEPGARKDHVEVHTIDTHGRVVLDPEINVFRDAEPEVSSGGEARVGQFKVLDA 122
Query: 329 QTPLKDFFCFSSSDCTMDSNLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTGF 150
+ L D +++ + +L D + LG+ RLL ELL+ L Q V
Sbjct: 123 EAALDDLAGLFAANGDVCGDLLTAADPEAADGEARLGERRLLVGELLEDLSSLCQRVALS 182
Query: 149 TNTYVQAKLSDMKIPH 102
++ V+ +L + PH
Sbjct: 183 SDADVEDELLNADTPH 198
>UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125;
Bacteria|Rep: 50S ribosomal protein L5 -
Propionibacterium acnes
Length = 210
Score = 58.4 bits (135), Expect = 1e-07
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Frame = +3
Query: 93 KNVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 263
+N M + K+ +N+ VG++ + A + + +TGQ+P +KAR ++ F +R
Sbjct: 32 RNPMLIPGLEKIVVNMGVGDAAHDSKVMDGAIRDITAITGQKPQVTKARKSIAQFKLREG 91
Query: 264 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHI-DLGIK 422
+ I H T+RG + E +R L ++R++ L + F GN+ FG+ E + L I
Sbjct: 92 QPIGCHVTLRGDRMWEFADRLLTLALPRIRDFRGLNSNQFDGKGNYTFGLSEQVMFLEID 151
Query: 423 YDPSIGIYGLDFYVV 467
D + I G+D V
Sbjct: 152 QDKIVRIRGMDITFV 166
>UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3;
Bacteria|Rep: 50S ribosomal protein L5 - Pelagibacter
ubique
Length = 184
Score = 58.0 bits (134), Expect = 1e-07
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Frame = +3
Query: 93 KNVMRNLHIRKLCLNICVGESGD--RLTRAAKV-LEQLTGQQPVFSKARYTVRSFGIRRN 263
KN + K+ +N+ +G G ++ ++ + L ++TGQ+P +K + +V +F R+
Sbjct: 24 KNTYMGPKVEKVVINMGLGLDGADAKIMKSTEEDLGKITGQKPTVTKFKKSVANFKTRKG 83
Query: 264 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIK 422
+ T+RG K E L+R + +++++ L F GN+ FGI+EHI +
Sbjct: 84 TNAGLKVTLRGNKMYEFLDRLVNIALPRIKDFRGLSPKGFDKFGNYTFGIKEHIIFPEVN 143
Query: 423 YDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFP 530
+D I GLD VV+ N H K+ FP
Sbjct: 144 FDRIDKIRGLDIVVVIS--ALNKDHSFALLEKLNFP 177
>UniRef50_Q6YR10 Cluster: 50S ribosomal protein L5; n=22;
Bacteria|Rep: 50S ribosomal protein L5 - Onion yellows
phytoplasma
Length = 181
Score = 54.8 bits (126), Expect = 1e-06
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Frame = +3
Query: 87 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQL---TGQQPVFSKARYTVRSFGIR 257
N K+VM+ + K+ +N+ VG++ + V+E+L +GQ PV +KA+ + +F +R
Sbjct: 23 NYKSVMQVPKVEKVVINMGVGDAIFNVKVLDDVVEELKLLSGQSPVITKAKKAISNFKLR 82
Query: 258 RNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-G 416
I T+RGA+ E L + +VR++ + +F GN+ G++E I
Sbjct: 83 EGMPIGAKVTLRGARKEAFLCKLTRLVFPRVRDFRGISGKSFDGRGNYALGLKEQIVFPE 142
Query: 417 IKYDPSIGIYGLDFYVV 467
I D I G+D +V
Sbjct: 143 INIDKVKKIRGMDIIIV 159
>UniRef50_Q6AP59 Cluster: 50S ribosomal protein L5; n=77;
Bacteria|Rep: 50S ribosomal protein L5 - Desulfotalea
psychrophila
Length = 179
Score = 52.8 bits (121), Expect = 5e-06
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Frame = +3
Query: 96 NVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 266
N M+ I K+ LN+ +GE+ + AA+ L ++ GQ+ V +KA+ ++ +F +R
Sbjct: 24 NPMQIPKIEKIVLNMGLGEAVQNPKIVEGAAEELTKIAGQRAVVTKAKKSIATFKLREGM 83
Query: 267 KIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKY 425
I T+RG K + L + + +VR++ + F GN+ GIQE I I Y
Sbjct: 84 PIGCRVTLRGEKMYDFLSKLVNIALPRVRDFRGVSPKGFDGRGNYSMGIQEQIIFPEIDY 143
Query: 426 DPSIGIYGLDFYVV 467
D I G + +V
Sbjct: 144 DKIDKIKGFNITIV 157
>UniRef50_Q6B8W5 Cluster: Chloroplast 50S ribosomal protein L5; n=4;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L5 -
Gracilaria tenuistipitata var. liui (Red alga)
Length = 179
Score = 52.4 bits (120), Expect = 7e-06
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Frame = +3
Query: 93 KNVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 263
KN+ + + K+ +N +GE+ + L ++ + +TGQ+P +K++ + F IR N
Sbjct: 24 KNIHQIPKLVKITINRGLGEAANNKQVLEKSMNEIAAITGQKPKITKSKKAIAGFKIREN 83
Query: 264 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIK 422
I + T+R K + L + + ++R++ + F GN+ G++E I IK
Sbjct: 84 IAIGLVVTLRRDKMYDFLNKLINLALPRIRDFRGISYKTFDGRGNYNLGLKEQIIFPEIK 143
Query: 423 YDPSIGIYGLDFYVV 467
YD I GLD +V
Sbjct: 144 YDNVDKIRGLDITIV 158
>UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellular
organisms|Rep: 50S ribosomal protein L5 - Synechocystis
sp. (strain PCC 6803)
Length = 180
Score = 52.0 bits (119), Expect = 9e-06
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 10/135 (7%)
Frame = +3
Query: 93 KNVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 263
KN+ + + K+ +N +GE+ L + L +TGQ+PV ++AR + F IR
Sbjct: 24 KNIHQVPKLTKVTVNRGLGEASQNAKALESSLTELATITGQKPVVTRARKAIAGFKIREG 83
Query: 264 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIK 422
+ V T+R + L+R + ++R++ + ++F GN+ GI+E + I
Sbjct: 84 MPVGVMVTLRSERMYAFLDRLINLALPRIRDFRGISPNSFDGRGNYSLGIREQLIFPEID 143
Query: 423 YDPSIGIYGLDFYVV 467
YD I G+D ++
Sbjct: 144 YDTIDQIRGMDVSII 158
>UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas
jakobiformis|Rep: Ribosomal protein L5 - Malawimonas
jakobiformis
Length = 174
Score = 51.6 bits (118), Expect = 1e-05
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Frame = +3
Query: 93 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 272
KN+M I+K+ +NI V +S +R+ VLE +TGQ+ KA+ ++ SF +R++ I
Sbjct: 21 KNIMEIPSIKKISVNITV-DSKNRVIEPLMVLELITGQKAKVLKAKKSISSFNLRKDMYI 79
Query: 273 AVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE---HIDLGIKY 425
A T++ + + + K+RE++ DN + N+ I+ ++ ++
Sbjct: 80 ACKVTLQKKNMYNFINKLINIVLPKIREFKGFSVDNIDSQNNYTLSIKNMSIFPEIEYQF 139
Query: 426 DPSIGIYGLDFYVV 467
D IYG+D +V
Sbjct: 140 DIFNKIYGMDITIV 153
>UniRef50_Q1ACG2 Cluster: Chloroplast 50S ribosomal protein L5; n=5;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L5 -
Chara vulgaris (Common stonewort)
Length = 189
Score = 51.2 bits (117), Expect = 2e-05
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Frame = +3
Query: 96 NVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 266
N+ + +++K+ +N GE+ L K L + Q+P+ ++AR + F IR+
Sbjct: 25 NIHQLPYLKKIVINCGFGEASQNSKFLEGTIKDLSIIASQKPIVTRARKAIAGFQIRKKM 84
Query: 267 KIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKY 425
+ V T+RG L+R + ++++++ L +F GNF FGI+E + I Y
Sbjct: 85 PVGVCVTLRGETMYAFLDRLIHLALPRIKDFQGLNWKSFDGYGNFHFGIREQLIFPEIHY 144
Query: 426 DPSIGIYGLDFYVV 467
D I G++ ++
Sbjct: 145 DKIDKIRGMNISII 158
>UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia
tsutsugamushi Boryong|Rep: 50S ribosomal protein L5 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 189
Score = 50.0 bits (114), Expect = 4e-05
Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Frame = +3
Query: 117 IRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 287
I+K+ + +CVG++ + K + +TGQ+P KA+ ++ +F +R+ IA T
Sbjct: 36 IKKIVVTMCVGDAVVDSKIIYYVKKCMAMITGQEPGLIKAKKSIAAFKLRKGMPIACKVT 95
Query: 288 VRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE 401
+R +AE+ + R + ++++++ +F GNF FGI++
Sbjct: 96 LRKKRAEDFIRRLVFEVFPRIKDFKGFSIKSFDREGNFSFGIKD 139
>UniRef50_A5KRR2 Cluster: 50S ribosomal protein L5; n=1; candidate
division TM7 genomosp. GTL1|Rep: 50S ribosomal protein
L5 - candidate division TM7 genomosp. GTL1
Length = 194
Score = 48.4 bits (110), Expect = 1e-04
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Frame = +3
Query: 177 AKVLEQLTGQQPVFSKARYTVRSFGIRRN-EKIAVHCTVRGAKAEEILERGL-----KVR 338
+ L ++TGQQPV AR ++ SF IR +I V T+RGA+ E L+R + +VR
Sbjct: 64 SNTLRKITGQQPVDRMARKSIASFKIRSGMNRIGVSVTLRGARMYEFLDRLVNIALPRVR 123
Query: 339 EYE-LRRDNFSATGNFGFGI-QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKT 512
++ + F +GN+ GI + I + ++ + ++GL V H R
Sbjct: 124 DFHGVGAKGFDHSGNYSLGITDQSIFAELAFEDTQVLHGLQVTFVFRTE--KPEHTRNLL 181
Query: 513 GKVGFP 530
K G P
Sbjct: 182 EKFGMP 187
>UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast
precursor; n=43; cellular organisms|Rep: 50S ribosomal
protein L5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 262
Score = 48.4 bits (110), Expect = 1e-04
Identities = 30/130 (23%), Positives = 69/130 (53%), Gaps = 10/130 (7%)
Frame = +3
Query: 96 NVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 266
N+ + ++K+ +N +G++ L A K + +TGQ+P+ ++AR ++ +F IR ++
Sbjct: 79 NIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQKPIKTRARASIATFKIREDQ 138
Query: 267 KIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEH-IDLGIKY 425
+ + T+RG L+R + + R+++ + +F GN+ G+++ + I++
Sbjct: 139 PLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVSPSSFDGNGNYSIGVKDQGVFPEIRF 198
Query: 426 DPSIGIYGLD 455
D G+D
Sbjct: 199 DAVGKTRGMD 208
>UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2;
Epsilonproteobacteria|Rep: 50S ribosomal protein L5 -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 181
Score = 47.6 bits (108), Expect = 2e-04
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
Frame = +3
Query: 93 KNVMRNLHIRKLCLNICVG---ESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 263
KN M+ + K+ +++ G + + + + GQ+ A+ +V F +R
Sbjct: 22 KNPMQTPALEKIVISVGAGFAMKDNKLIQNIEDTITTIAGQKASTVIAKKSVAGFKVREG 81
Query: 264 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIK 422
+ V T+RG K +R + +V+++ + R+ F GN+ FG+QE + +
Sbjct: 82 MPVGVRVTLRGEKMYNFFDRLVSMALPRVKDFRGVPRNGFDGRGNYNFGLQEQLIFPEVS 141
Query: 423 YDPSIGIYGLDFYVV 467
YD + I+G++ VV
Sbjct: 142 YDSVMQIHGMNITVV 156
>UniRef50_Q2GEC7 Cluster: 50S ribosomal protein L5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 50S ribosomal
protein L5 - Neorickettsia sennetsu (strain Miyayama)
Length = 177
Score = 46.0 bits (104), Expect = 6e-04
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 10/125 (8%)
Frame = +3
Query: 123 KLCLNICVG-ESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVR 293
K+CL++ +G S D L A + L + GQ+ V + A+ ++ SF +R+ + T+R
Sbjct: 31 KVCLSVGLGGASSDSKLLASAVEDLSLIAGQKAVVTVAKKSISSFKLRKGFPVGCRVTLR 90
Query: 294 GAKAEEILERGLKV-----REYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 452
+ + + R L + ++++ NF GN FG+ EHI + +D + I G+
Sbjct: 91 KRRMFDFINRLLYMALPDQKDFKGFTMRNFDGHGNMAFGLTEHIVFPEVDFDKTYRIIGM 150
Query: 453 DFYVV 467
+ VV
Sbjct: 151 NVVVV 155
>UniRef50_P56033 Cluster: 50S ribosomal protein L5; n=6;
Bacteria|Rep: 50S ribosomal protein L5 - Helicobacter
pylori (Campylobacter pylori)
Length = 181
Score = 45.6 bits (103), Expect = 8e-04
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
Frame = +3
Query: 93 KNVMRNLHIRKLCLNICVGESGDRLT---RAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 263
KN M + K+ +++ G + A+ + + GQ+ V +KA+ +V F IR
Sbjct: 23 KNPMLLPKLEKIVISVGAGAHAKDMKIMQNIAQTISLIAGQKAVITKAKKSVAGFKIREG 82
Query: 264 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIK 422
+ T+R + LE+ + +V+++ + R+ F GN+ FGI E + +
Sbjct: 83 MAVGAKVTLRNKRMYNFLEKLIVISLPRVKDFRGISRNGFDGCGNYTFGINEQLIFPEVV 142
Query: 423 YDPSIGIYGLDFYVV 467
YD + +G++ +V
Sbjct: 143 YDDIMVSHGMNITMV 157
>UniRef50_Q6KI43 Cluster: 50S ribosomal protein L5; n=12;
Bacteria|Rep: 50S ribosomal protein L5 - Mycoplasma
mobile
Length = 182
Score = 45.2 bits (102), Expect = 0.001
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
Frame = +3
Query: 93 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLT---GQQPVFSKARYTVRSFGIRRN 263
K+ M+ I+K+ +N+ G +V+ +LT GQ P + A+ ++ SF IR
Sbjct: 23 KSPMQIPRIKKIVINMTAGNEVSNTKAVEEVINELTLITGQTPYKTHAKKSLASFKIREG 82
Query: 264 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIK 422
+ T+R K + L++ + ++R++ + +F GNF GI+E I I
Sbjct: 83 MPMGGKVTLRRDKMWDFLQKLIDIVIPRIRDFRGISPKSFDGRGNFALGIEEEIIFPEID 142
Query: 423 YDPSIGIYGLDFYVV 467
+D GLD +V
Sbjct: 143 FDKIRRNKGLDVIIV 157
>UniRef50_O21252 Cluster: Mitochondrial 60S ribosomal protein L5;
n=3; cellular organisms|Rep: Mitochondrial 60S ribosomal
protein L5 - Reclinomonas americana
Length = 182
Score = 44.4 bits (100), Expect = 0.002
Identities = 32/129 (24%), Positives = 68/129 (52%), Gaps = 12/129 (9%)
Frame = +3
Query: 117 IRKLCLNICVGESGD---RLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 287
I K+ +N+ V E+ ++ +LE +TGQ+ + +KA+ ++ +F IR+ I V T
Sbjct: 31 IDKIIVNMGVKEAASDKKQILAPLLILELITGQKAIVTKAKKSISNFKIRKGFPIGVSVT 90
Query: 288 VRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHI---DLGIKYDPSIG 440
+RG E L + + K+R+++ + + + G+ GI++ + ++ +YD
Sbjct: 91 LRGNNMYEFLSKLITLVLPKIRDFKGVPFTSINKYGHLAIGIKDLLVFPEIESEYDKFNR 150
Query: 441 IYGLDFYVV 467
+YG + +V
Sbjct: 151 VYGANIVIV 159
>UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio
cholerae NCTC 8457|Rep: 50S ribosomal protein L5 -
Vibrio cholerae NCTC 8457
Length = 112
Score = 43.6 bits (98), Expect = 0.003
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +3
Query: 96 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 266
+VM+ I K+ LN+ VGE+ D+ L AA + ++GQ+P+ +KAR +V F IR
Sbjct: 24 SVMQVPRIEKITLNMGVGEAINDKKLLENAASDMAIISGQKPLITKARKSVAGFKIREGY 83
Query: 267 KIAVHCTVRGAK 302
I T+RG +
Sbjct: 84 PIGCKVTLRGER 95
>UniRef50_Q2EEW3 Cluster: Ribosomal protein L5; n=1; Helicosporidium
sp. ex Simulium jonesii|Rep: Ribosomal protein L5 -
Helicosporidium sp. subsp. Simulium jonesii (Green alga)
Length = 181
Score = 43.6 bits (98), Expect = 0.003
Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Frame = +3
Query: 87 NSKNVMRNLHIRKLCLNICVG-----ESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFG 251
N K + I+K+ ++ +G E + + + K +TGQ+P ++A+ + +F
Sbjct: 22 NKKKALEVPVIKKIVISRGIGKANTLEINNYIEESIKEFLIMTGQKPKLNRAKKHIAAFK 81
Query: 252 IRRNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL 413
I++ + + T+RGAK L + + +R+++ + F + GN F I ++
Sbjct: 82 IKKKMILGLSVTLRGAKMYAFLYKFINIILPNIRQFQGIENKQFDSLGNITFPIYSQSNI 141
Query: 414 -GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFP 530
+ Y+P + G F V + NV+ + +GFP
Sbjct: 142 PELPYNPRVEKRG--FNVTINIKAKNVSEAKALCAYLGFP 179
>UniRef50_P49547 Cluster: Chloroplast 50S ribosomal protein L5; n=4;
Bacillariophyta|Rep: Chloroplast 50S ribosomal protein
L5 - Odontella sinensis (Marine centric diatom)
Length = 238
Score = 43.2 bits (97), Expect = 0.004
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Frame = +3
Query: 165 LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGL----- 329
L ++ +TGQ+P+ ++A+ + F IR N ++ + T+RG+K L + +
Sbjct: 68 LKKSINEFTAITGQKPIITRAKKAIAGFKIRENMELGLTVTLRGSKMYSFLTKLIFFTFA 127
Query: 330 KVREYE-LRRDNFSATGNFGFGIQEHI 407
++R++ L +F GN+ G++E +
Sbjct: 128 QIRDFRGLSVRSFDKAGNYTLGLKEQL 154
>UniRef50_A7CZB2 Cluster: Ribosomal protein L5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L5 - Opitutaceae
bacterium TAV2
Length = 204
Score = 41.5 bits (93), Expect = 0.013
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Frame = +3
Query: 93 KNVMRNLHIRKLCLNICVGESGDRLTRAAKV---LEQLTGQQPVFSKARYTVRSFGIRRN 263
KN I K+ LN + D+ T+ A + L + GQ+PV +K+R V +F +R+
Sbjct: 33 KNKHEVPQIVKINLNTGIDAEADK-TQIADIQRDLGNIAGQKPVLTKSRKAVSNFKLRQG 91
Query: 264 EKIAVHCTVRGAKAEEILERGLKV-----REYELRRDNFSATGNFGFGIQE 401
+ + + T+RG E L R L V R++ GN+ GI +
Sbjct: 92 QIVGAYVTLRGNAMWEFLYRLLAVALPTIRDFRGVPAKLDGRGNYNLGISD 142
>UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 188
Score = 40.3 bits (90), Expect = 0.030
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +3
Query: 258 RNEKIAVHCTVRGAKAEEILERGLKVREYEL 350
R KIA + TV+G KA +LE GLKV+EYEL
Sbjct: 114 RYTKIACYVTVKGEKAMRLLESGLKVKEYEL 144
>UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;
n=1; Prototheca wickerhamii|Rep: Mitochondrial 60S
ribosomal protein L5 - Prototheca wickerhamii
Length = 231
Score = 39.9 bits (89), Expect = 0.040
Identities = 24/100 (24%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Frame = +3
Query: 93 KNVMRNLHIRKLCLNIC----VGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 260
KN+M + + K+ N GE + + A LE +TGQ+P ++ A+ ++ +F +R+
Sbjct: 60 KNIMECVSLNKIVCNTSSKHYAGEK-ESILPAFTALEMITGQKPKYTCAKKSISTFKLRQ 118
Query: 261 NEKIAVHCTVRGAKAEEILERGLKVREYELR--RDNFSAT 374
N+ + ++RG LE+ + + ++ +N+S++
Sbjct: 119 NQILGCKNSLRGNTMYRFLEKYISIVSTRIKDWSENYSSS 158
>UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep:
F13M7.17 - Arabidopsis thaliana (Mouse-ear cress)
Length = 665
Score = 36.7 bits (81), Expect = 0.37
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +3
Query: 309 EILERGLKVREYELRR--DNFSATGNFGFGIQEH---IDLGIKYDPSIGIYGLDFYVVLG 473
E+LE+GLK EY + S +G G GI+ H +D GIK D +IG +D Y G
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCG 342
>UniRef50_Q9G4D4 Cluster: Ribosomal protein L5; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L5 -
Thraustochytrium aureum
Length = 190
Score = 35.5 bits (78), Expect = 0.85
Identities = 20/77 (25%), Positives = 38/77 (49%)
Frame = +3
Query: 93 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 272
K V ++ R LN S L ++E +TGQ+P S ++ +F IR+ + +
Sbjct: 32 KEVFIHISFRSSFLN---ASSNVVLVSCIFIIELITGQKPKISFSKKDNSNFNIRKGDLV 88
Query: 273 AVHCTVRGAKAEEILER 323
++ T+RG + +E+
Sbjct: 89 GIYVTLRGPRIFSFIEK 105
>UniRef50_A1RXI7 Cluster: Methyltransferase type 11; n=1;
Thermofilum pendens Hrk 5|Rep: Methyltransferase type 11
- Thermofilum pendens (strain Hrk 5)
Length = 297
Score = 35.1 bits (77), Expect = 1.1
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +3
Query: 186 LEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYE 347
+ +TG P+ S A VR G+ R EK+ CT G A LERG +V E
Sbjct: 121 MHNITGIDPL-SDAERKVRMLGVARGEKVLDVCTGLGYTAIRALERGAEVVSIE 173
>UniRef50_Q5DZU7 Cluster: Putative uncharacterized protein; n=1;
Vibrio fischeri ES114|Rep: Putative uncharacterized
protein - Vibrio fischeri (strain ATCC 700601 / ES114)
Length = 120
Score = 33.9 bits (74), Expect = 2.6
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 219 SKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNF 383
+KA + ++ G+RRNE+ ++ + + E+G+ + E+E TG F
Sbjct: 21 AKAEFKIKGMGMRRNEEALIYRIPSHSTKAQYYEKGVTINEFEKAHQRLVNTGFF 75
>UniRef50_Q589Y5 Cluster: Serine protease; n=3; Obtectomera|Rep:
Serine protease - Bombyx mori (Silk moth)
Length = 392
Score = 33.9 bits (74), Expect = 2.6
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 258 RNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFG-IQEHIDLGI-KYDP 431
R+ A HCT R KAEE+ R + EY+++R N+S T NF I++H I Y
Sbjct: 193 RHVLTAAHCTRRW-KAEELFVR---LGEYDMKRTNYSRTYNFKVSEIRQHEAFQIANYKN 248
Query: 432 SIGIYGLD 455
I I L+
Sbjct: 249 DIAILKLE 256
>UniRef50_Q61E12 Cluster: Putative uncharacterized protein CBG12266;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG12266 - Caenorhabditis
briggsae
Length = 418
Score = 33.5 bits (73), Expect = 3.4
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 448 DWTFTSYLAGQVST*HTEGVRQEKWDFPTASQRKML 555
DWTFT++ G V+ E ++EKWDF S +K L
Sbjct: 383 DWTFTTHYKGTVNGLKVE--KREKWDFRKNSAKKSL 416
>UniRef50_A6D0I6 Cluster: Putative uncharacterized protein; n=1;
Vibrio shilonii AK1|Rep: Putative uncharacterized
protein - Vibrio shilonii AK1
Length = 353
Score = 33.1 bits (72), Expect = 4.6
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 345 ELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG--IYGLDFYVVLGRPGFNVAHRRRKTGK 518
E ++D + T + F +++ D+ +YD IG ++G+ G PG +AH R +
Sbjct: 236 EFKKDFPNETLRYSFDAKDYRDIFSEYDLMIGYRVHGIGMCASQGTPGIMIAHDPRASTV 295
Query: 519 VGF 527
GF
Sbjct: 296 KGF 298
>UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: Wbgx
protein - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 377
Score = 32.7 bits (71), Expect = 6.0
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 306 EEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYD 428
+E+ +R +R + + D+F GN G+ + + +D+G KYD
Sbjct: 199 DEMAKRARLIRNHAIVNDSFDKDGNLGY-VYDVVDIGQKYD 238
>UniRef50_Q2R3R6 Cluster: Transposon protein, putative, Pong
sub-class; n=2; Oryza sativa|Rep: Transposon protein,
putative, Pong sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 596
Score = 32.7 bits (71), Expect = 6.0
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 264 EKIAVHCTVRGAKAEEILERGLK 332
EKIA + TVRG KA ++LE GLK
Sbjct: 280 EKIACYVTVRGEKAMQLLESGLK 302
>UniRef50_A4PID3 Cluster: Chitinase; n=1; Monochamus alternatus|Rep:
Chitinase - Monochamus alternatus (Japanese pine sawyer)
Length = 371
Score = 32.7 bits (71), Expect = 6.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 560 LHSIFLCEAVGKSHFSCLTPSVCYVETWPAKYD 462
L S+ +C AV HF+ T +CY E+W A YD
Sbjct: 3 LKSLLICLAVFIQHFAAGTKVICYYESWNA-YD 34
>UniRef50_Q1MDG2 Cluster: Conserved hypothetical exported protein
precursor; n=2; Rhizobium|Rep: Conserved hypothetical
exported protein precursor - Rhizobium leguminosarum bv.
viciae (strain 3841)
Length = 560
Score = 32.3 bits (70), Expect = 8.0
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = -1
Query: 301 LAPRTVQWTAIFSLRRIPKDRTVYLALENTGCCPVSCSNTLAARVSLSPDSPTHM 137
++P VQ A + ++PK + + L + G C C+ ++A ++PD+P +
Sbjct: 313 VSPAPVQDAAAETSEKLPKTQPMDFLLMSNGNCREECTQWISADGDITPDTPARL 367
>UniRef50_A7A6S7 Cluster: Putative uncharacterized protein; n=1;
Bifidobacterium adolescentis L2-32|Rep: Putative
uncharacterized protein - Bifidobacterium adolescentis
L2-32
Length = 257
Score = 32.3 bits (70), Expect = 8.0
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Frame = +3
Query: 132 LNICVGE-SGDRLTR--AAKVLEQLT-GQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGA 299
+N VGE +G+ + AA+ L+ LT QP S+A Y SFG R+ + C VR
Sbjct: 41 VNPTVGEMTGEYVATGSAAETLQSLTIDDQP--SRAGYDRDSFGFRQTDDDGNGCDVR-- 96
Query: 300 KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG 440
E++L R L Y + S +G+ G G + G+ DP G
Sbjct: 97 --EDVLARDLTDVRYIAGSGSSSDSGS-GSGAGCKVKSGVLSDPYTG 140
>UniRef50_A7Q5M3 Cluster: Chromosome undetermined scaffold_53, whole
genome shotgun sequence; n=4; Vitis vinifera|Rep:
Chromosome undetermined scaffold_53, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 1341
Score = 32.3 bits (70), Expect = 8.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -3
Query: 242 PHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPH 102
P C+PSL R+++CE L+ T Y+ A + +PH
Sbjct: 1131 PECLPSLKSLRIINCEGLECFPARGLSTPTLTELYISACQNLKSLPH 1177
>UniRef50_Q58718 Cluster: DNA double-strand break repair rad50
ATPase; n=1; Methanocaldococcus jannaschii|Rep: DNA
double-strand break repair rad50 ATPase - Methanococcus
jannaschii
Length = 1005
Score = 32.3 bits (70), Expect = 8.0
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = +3
Query: 84 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 263
+ K V+ NL K+ LN +GE + R K+L++L + + + ++
Sbjct: 458 EEKKKVLENLQKEKIELNKKLGEINSEIKRLKKILDELKEVEGKCPLCKTPIDE--NKKM 515
Query: 264 EKIAVHCTVRGAKAEEILERGLKVREYE 347
E I H T K E+ E K+RE E
Sbjct: 516 ELINQHKTQLNNKYTELEEINKKIREIE 543
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,686,919
Number of Sequences: 1657284
Number of extensions: 11552181
Number of successful extensions: 30710
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 29769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30677
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -