Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l01r
         (705 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    25   0.92 
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    25   0.92 
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    25   0.92 
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    25   0.92 
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    24   1.2  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   2.8  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   3.7  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    22   4.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   4.9  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   6.5  

>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 332 NNYSYLGRSENKNSNVQ*IYSIFNY 258
           NNY Y   + N N+N + +Y   NY
Sbjct: 94  NNYKYNYNNNNYNNNCKKLYYNINY 118


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 332 NNYSYLGRSENKNSNVQ*IYSIFNY 258
           NNY Y   + N N+N + +Y   NY
Sbjct: 94  NNYKYNYNNNNYNNNCKKLYYNINY 118


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 332 NNYSYLGRSENKNSNVQ*IYSIFNY 258
           NNY Y   + N N+N + +Y   NY
Sbjct: 94  NNYKYNYNNNNYNNNCKKLYYNINY 118


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 332 NNYSYLGRSENKNSNVQ*IYSIFNY 258
           NNY Y   + N N+N + +Y   NY
Sbjct: 94  NNYKYNYNNNNYNNNCKKLYYNINY 118


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 368 NLKYFAYKDIIVNNYSYLGRSENKNSNVQ*IYSIFNY 258
           N KY  Y +   N  +Y   + N N+N + +Y   NY
Sbjct: 321 NYKYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYNINY 357


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 197 RM*KNFNNV*CDVKRIQTTHTQWPA 123
           R+ +  NN+   VK+I T   +WPA
Sbjct: 333 RIQRQENNIRPMVKQIDTVAAEWPA 357


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 151 SKQLTHSGQPIYYKVSLKT 95
           S  LTH G+PI  ++ + T
Sbjct: 571 SHHLTHKGKPIRMRIGIHT 589


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 110 FVINRLATVCELFGYV 157
           F+   LAT+C  F YV
Sbjct: 6   FIFALLATICAAFAYV 21


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 106 SLKTIKKAFFIRLHTRKKCTNE 41
           ++KTIKK  F+  +  +  TNE
Sbjct: 512 TMKTIKKGSFVTQYVGEVITNE 533


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -2

Query: 362 KYFAYKDIIVNNYSYLGRSENKNSNVQ*IYSIFNY 258
           K  +  + + NNY+Y     N N+N    Y    Y
Sbjct: 80  KIISNNNSLSNNYNYNNNYNNYNNNYNTNYKKLQY 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,651
Number of Sequences: 438
Number of extensions: 3533
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)