Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l01f
         (636 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3238|AAF46741.2|  445|Drosophila melanogaster CG15674-P...    28   9.2  

>AE013599-3238|AAF46741.2|  445|Drosophila melanogaster CG15674-PA
           protein.
          Length = 445

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +1

Query: 358 YNFLNLKYFAYKDIIVNNYSYLGRS--ENKNSNVQ*IYSIFNYSIV*KSNINMYSI 519
           Y   N+ Y  ++++  +   +LG S   N +   + IY   NY  V K  +NM S+
Sbjct: 196 YQLRNITYLPWRNVTNSYKMHLGDSVLRNPSGERKPIYGSLNYDFVEKILVNMSSV 251


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,699,481
Number of Sequences: 53049
Number of extensions: 402198
Number of successful extensions: 613
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)