BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10k23f (595 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY137766-1|AAM94344.1| 78|Anopheles gambiae heat shock protein... 58 2e-10 AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 24 3.2 DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific do... 23 7.4 DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 23 7.4 AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific do... 23 7.4 AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doub... 23 7.4 AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 9.8 >AY137766-1|AAM94344.1| 78|Anopheles gambiae heat shock protein 70 protein. Length = 78 Score = 58.0 bits (134), Expect = 2e-10 Identities = 26/30 (86%), Positives = 29/30 (96%) Frame = +1 Query: 505 NAVITVPAYFNDSQRQATKDAGTISGLNVL 594 +AVITVPAYFNDSQRQATKDAG I+GLNV+ Sbjct: 1 DAVITVPAYFNDSQRQATKDAGAIAGLNVM 30 >AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. Length = 3361 Score = 24.2 bits (50), Expect = 3.2 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%) Frame = +3 Query: 84 NGKSTRSRNRSGYHVLLRWCLPAREGGDHR--QRPG 185 +GK RS + +++LL P REG H+ Q PG Sbjct: 1802 DGKYKRSYSYEPHNLLLSNLFPPREGFHHKAVQLPG 1837 >DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific doublesex protein protein. Length = 265 Score = 23.0 bits (47), Expect = 7.4 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%) Frame = +3 Query: 495 NCAECSYHGSRVLQ*LSKTSHKR-CRY 572 NCA C HG ++ HKR C+Y Sbjct: 40 NCARCRNHGLKI----GLKGHKRYCKY 62 >DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doublesex protein protein. Length = 622 Score = 23.0 bits (47), Expect = 7.4 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%) Frame = +3 Query: 495 NCAECSYHGSRVLQ*LSKTSHKR-CRY 572 NCA C HG ++ HKR C+Y Sbjct: 40 NCARCRNHGLKI----GLKGHKRYCKY 62 >AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific doublesex protein protein. Length = 241 Score = 23.0 bits (47), Expect = 7.4 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%) Frame = +3 Query: 495 NCAECSYHGSRVLQ*LSKTSHKR-CRY 572 NCA C HG ++ HKR C+Y Sbjct: 40 NCARCRNHGLKI----GLKGHKRYCKY 62 >AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doublesex protein protein. Length = 283 Score = 23.0 bits (47), Expect = 7.4 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%) Frame = +3 Query: 495 NCAECSYHGSRVLQ*LSKTSHKR-CRY 572 NCA C HG ++ HKR C+Y Sbjct: 40 NCARCRNHGLKI----GLKGHKRYCKY 62 >AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein protein. Length = 1645 Score = 22.6 bits (46), Expect = 9.8 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = -3 Query: 134 QEYVVPRSIPTAGAFA 87 Q+Y PR++ +AG FA Sbjct: 1244 QDYAPPRALMSAGGFA 1259 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 660,645 Number of Sequences: 2352 Number of extensions: 14192 Number of successful extensions: 24 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 24 length of database: 563,979 effective HSP length: 61 effective length of database: 420,507 effective search space used: 57188952 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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