BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10k21r (727 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 70 2e-14 AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 24 1.4 AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 24 1.4 AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 23 1.9 EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 22 4.4 EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 21 7.7 >AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface protein chaoptin protein. Length = 782 Score = 69.7 bits (163), Expect = 2e-14 Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 8/219 (3%) Frame = -3 Query: 692 RQSLELDISHNPLNNVFTRLLAPLEKLEYLNMGHSNLSYIGPDSFAKMTSMKRLVLSGND 513 R E+ S N + NV A L +LE +++ + + + +F + S+KRL L GN Sbjct: 92 RDLTEVYFSFNSVRNVQQHTFADLIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNK 151 Query: 512 LLSLEAGLFGNLTQLTTLELEMCGLKRPLNANVFFKNLTYMDLREIKLGSNPLVIPDKGP 333 + ++ F NL +L L+L + L+ N+ F + + + + + N L+ P Sbjct: 152 IATIAYETFQNLPELEDLDLAYNSIS-SLDFNI-FDQVGSLGMFHVNMSHNKLINLVVAP 209 Query: 332 VFPKQ-------LSQVTTLDLSNCNITSLKVDAFKNT-INLTELNLSGNRLRSNDGNLAF 177 P + L + LDLS NITS+ F+ ++L +L L N+L + +L Sbjct: 210 SVPFEQDTGLGGLQNIKVLDLSFNNITSVAKQFFRPVELSLMQLYLGHNKLLNATKDL-- 267 Query: 176 LEILKHLEKINLSYNNLTTIDPQIFTHNPKLHSLNLLGN 60 + HL+ ++LS+N+L +D F + KL L+ N Sbjct: 268 FGNMPHLQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHN 306 Score = 49.2 bits (112), Expect = 3e-08 Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 2/208 (0%) Frame = -3 Query: 677 LDISHNPLNNVFTRLLAPLEKLEYLNMGHSNLSYIGPDSFAKMTSMKRLVLSGNDLLSLE 498 LD+SHN L + +KL++L+ H+ +S I D F + +++ + S N L SL Sbjct: 277 LDLSHNSLYELDFDTFRNTKKLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHNRLRSLP 336 Query: 497 AGLFGNLTQLTTLELEMCGL-KRPLNANVFFKNLTYMDLREIKLGSNPLVIPDKGPVFPK 321 LF T L L++ L K PL + + L E+ L N + G + Sbjct: 337 DNLFRE-TGLERLDVSHNLLGKLPLTS---LSLASAQTLSELDLSWNSISSLSHGGQLAR 392 Query: 320 QLSQVTTLDLSNCNITSLKVDAFKNTINLTELNLSGN-RLRSNDGNLAFLEILKHLEKIN 144 ++ LDLS + + FK L LNL N +L L+F + L +N Sbjct: 393 -FKCLSWLDLSYNRLGQIDAGTFKGIPRLASLNLGHNSQLTLEINGLSFQGLEYTLLHLN 451 Query: 143 LSYNNLTTIDPQIFTHNPKLHSLNLLGN 60 L +L+ + P + T P L SL+L N Sbjct: 452 LDNVSLSQV-PALST--PNLLSLSLAFN 476 Score = 44.4 bits (100), Expect = 1e-06 Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 3/208 (1%) Frame = -3 Query: 683 LELDISHNPLNNVFTRLLAPLEKLEYLNMGHSNLSYIGPDSFAKMTSMKRLVLSGNDLLS 504 ++L + HN L N L + L+ L++ H++L + D+F ++ L S N + Sbjct: 251 MQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNRISE 310 Query: 503 LEAGLFGNLTQLTTLELEMCGLKRPLNANVFFK-NLTYMDLREIKLGSNPLVIPDKGPVF 327 + LF L L ++ L R L N+F + L +D+ LG PL Sbjct: 311 IPNDLFRFLGNLRIVDFSHNRL-RSLPDNLFRETGLERLDVSHNLLGKLPL--------- 360 Query: 326 PKQLSQVTTLDLSNCNITSLKVDAFKNTINLTELNLSGNRLR--SNDGNLAFLEILKHLE 153 T+L L++ L+EL+LS N + S+ G LA + L L+ Sbjct: 361 -------TSLSLASAQ-------------TLSELDLSWNSISSLSHGGQLARFKCLSWLD 400 Query: 152 KINLSYNNLTTIDPQIFTHNPKLHSLNL 69 LSYN L ID F P+L SLNL Sbjct: 401 ---LSYNRLGQIDAGTFKGIPRLASLNL 425 Score = 28.3 bits (60), Expect = 0.067 Identities = 58/254 (22%), Positives = 98/254 (38%), Gaps = 33/254 (12%) Frame = -3 Query: 683 LELDISHNPLNNVFTRLLAPLEKLEYLNMGHSNLSYIGPDSFAKMTSMKRLVLSGNDLLS 504 L L ++ N L V + + L YLN+ +++LS + P +T ++ L L GN + + Sbjct: 469 LSLSLAFNSLPTVALEVAGNISSLRYLNLDYNDLSAV-PIVTHSLTELRHLSLEGNPITT 527 Query: 503 LE-AGLFGNLTQ----------LTTLEL-EMCGLK--RPLNANVF--FKNLTYMDLREIK 372 L L G Q LT LE C ++ R L V+ KN + + Sbjct: 528 LSNTSLLGAANQLEELNLKNIDLTVLESGAFCKMQPLRTLKIGVYRNIKNFNIPSILQFN 587 Query: 371 LGSNPLVIP----------DKGPVFPKQLSQVTTLDLSNCNITSLKVDAFKN-TINLTEL 225 G L I + +P +L +T IT ++ T +LT Sbjct: 588 DGLKNLEIHVTKDTDTLDNEMRGAWPLKLQNLTLSGKGLKKITGKMFQGVRSPTFHLTVR 647 Query: 224 NLSGNRLRSND-GNLAFLEILKHLEKINLSYNNLTTIDPQIFTHNPK---LHSLNLLGNP 57 N S ++ + N+ + + + N+ NL P+ L L L+G Sbjct: 648 NTSIIKIPFDVFRNMLPVRNVSVDVRDNILLKNLQNPSTGSKPGKPRSAFLTDLKLMGGK 707 Query: 56 FICDCKI--AEMWD 21 + CDC + E+W+ Sbjct: 708 WSCDCDLGWVEVWE 721 >AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor candidate 46 protein. Length = 1451 Score = 23.8 bits (49), Expect = 1.4 Identities = 18/63 (28%), Positives = 29/63 (46%) Frame = -3 Query: 638 RLLAPLEKLEYLNMGHSNLSYIGPDSFAKMTSMKRLVLSGNDLLSLEAGLFGNLTQLTTL 459 R+ K+ YL H +LS F ++ + LVL GN LS+ LF +L Sbjct: 218 RVFISFSKICYL---HQHLSK-SVKLFNEVFGVSLLVLFGNSFLSIVLALFRTAAELQAS 273 Query: 458 ELE 450 +++ Sbjct: 274 QIK 276 >AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory receptor candidate 3 protein. Length = 398 Score = 23.8 bits (49), Expect = 1.4 Identities = 18/63 (28%), Positives = 29/63 (46%) Frame = -3 Query: 638 RLLAPLEKLEYLNMGHSNLSYIGPDSFAKMTSMKRLVLSGNDLLSLEAGLFGNLTQLTTL 459 R+ K+ YL H +LS F ++ + LVL GN LS+ LF +L Sbjct: 236 RVFISFSKICYL---HQHLSK-SVKLFNEVFGVSLLVLFGNSFLSIVLALFRTAAELQAS 291 Query: 458 ELE 450 +++ Sbjct: 292 QIK 294 >AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor candidate 61 protein. Length = 670 Score = 23.4 bits (48), Expect = 1.9 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = +2 Query: 647 HYSEDYAICLVLKIVENIKVIWKIA 721 +Y DY +CL + I + +I IA Sbjct: 130 NYETDYYVCLAMTITGPLVIIGNIA 154 >EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B protein. Length = 279 Score = 22.2 bits (45), Expect = 4.4 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 5/55 (9%) Frame = -3 Query: 194 DGNLAFLEILKHLEKINLSYNNLTTI-----DPQIFTHNPKLHSLNLLGNPFICD 45 DG + F + EK +L +N T +PQ H P+ H P ICD Sbjct: 70 DG-MVFNDYSSEYEKCDLPFNIDCTSRPKLQEPQPSQHCPRKHGYFAHEEPHICD 123 >EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglucosaminidase NAG2 protein. Length = 593 Score = 21.4 bits (43), Expect = 7.7 Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 1/22 (4%) Frame = -3 Query: 446 CGLKRPLNANVF-FKNLTYMDL 384 CG P+N NVF L Y D+ Sbjct: 343 CGQLNPINPNVFDVLKLLYNDI 364 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 156,762 Number of Sequences: 336 Number of extensions: 3333 Number of successful extensions: 19 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 122,585 effective HSP length: 55 effective length of database: 104,105 effective search space used: 19363530 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -