Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10k21r
(727 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 58 1e-09
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 31 0.22
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 30 0.29
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 28 1.2
SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomy... 28 1.2
SPCC4B3.05c |hem12||uroporphyrinogen decarboxylase |Schizosaccha... 28 1.6
SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces pom... 27 2.1
SPBC17A3.10 |pas4||peroxisomal ubiquitin-protein ligase E3 |Schi... 27 2.7
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 27 3.6
SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces po... 26 4.8
SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces pombe... 26 4.8
SPAC11E3.06 |map1||MADS-box transcription factor Map1|Schizosacc... 26 6.3
SPCC1235.12c |mug146||meiotically upregulated gene Mug46|Schizos... 25 8.3
SPAC186.09 |||pyruvate decarboxylase |Schizosaccharomyces pombe|... 25 8.3
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 25 8.3
SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces... 25 8.3
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 25 8.3
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 58.0 bits (134), Expect = 1e-09
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 2/210 (0%)
Frame = -3
Query: 683 LELDISHNPLNNVFTRLLAPLEKLEYLNMGHSNLSYIGPDSFAKMTSMKRLVLSGNDLLS 504
+ L++SHN ++ + KL+ L++ ++ S G A + ++ L +S ND+
Sbjct: 432 ISLNVSHNLSLDLPLDFMERCVKLKRLDISNNLRSPRGKPITA-LRQLEVLNMSRNDIYE 490
Query: 503 LEAGLFGNLTQLTTLELEMCGLKRPL--NANVFFKNLTYMDLREIKLGSNPLVIPDKGPV 330
L+ +F L++ + EL + K ++ + NLTY+DL + PL+I
Sbjct: 491 LDPLIFSGLSRNSLKELNIANNKLFFLPHSTRYLVNLTYLDLSYNNFVTFPLII------ 544
Query: 329 FPKQLSQVTTLDLSNCNITSLKVDAFKNTINLTELNLSGNRLRSNDGNLAFLEILKHLEK 150
+LSQ+ TL+ S+ N+ S + + L L L N L + + +LK+LE
Sbjct: 545 --TELSQLETLNFSH-NLLSQISSKIGSLVKLKHLYLQFNDLSNRLPQ--EIGLLKNLET 599
Query: 149 INLSYNNLTTIDPQIFTHNPKLHSLNLLGN 60
I+LSYN +T I + PKL+S+N+ N
Sbjct: 600 IDLSYNAITNI--ASLSECPKLNSINVACN 627
Score = 46.0 bits (104), Expect = 6e-06
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 5/210 (2%)
Frame = -3
Query: 674 DISHNPLNNVFTRLLAPLEKLEYLNMGHSNLSYIGPDSFAKMTSMKRLVLSGNDLLSLEA 495
DISH L + ++ L +E + + +++ + I D+ + M ++K L + ++ +
Sbjct: 665 DISHAKLIGLKDSVIETLVNVETVKVNYNHFTSIS-DAISAMQNLKYLSCTNCEMSYVSP 723
Query: 494 GLFGNLTQLTTLELEMCGLKR-PLN----ANVFFKNLTYMDLREIKLGSNPLVIPDKGPV 330
L G L L L+L +K P +++ NL+ L +IKL P+ K
Sbjct: 724 NL-GKLKHLVHLDLHANNIKIFPEEVWQVSSLKVVNLSSNILEKIKL---PVATSKKLTR 779
Query: 329 FPKQLSQVTTLDLSNCNITSLKVDAFKNTINLTELNLSGNRLRSNDGNLAFLEILKHLEK 150
QL + TL S ++SL F + EL L NRL ND A LE K L+
Sbjct: 780 TISQLKIMRTL--SGNPVSSLSSQEFVMP-TVEELYLVDNRL-GNDCFTA-LEYFKCLKV 834
Query: 149 INLSYNNLTTIDPQIFTHNPKLHSLNLLGN 60
+NLSYN LT I + F + L L + GN
Sbjct: 835 LNLSYNYLTEIPSKFFQNFSDLKHLFVSGN 864
Score = 40.3 bits (90), Expect = 3e-04
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = -3
Query: 365 SNPLVIPDKGPVFPKQLSQVTTLDLSNCNITSLKVDAFKNTINLTELNLSGNRLRSNDGN 186
SN VIP K ++P ++ +L++S+ L +D + + L L++S N LRS G
Sbjct: 415 SNLEVIPVK--IYP-YAHELISLNVSHNLSLDLPLDFMERCVKLKRLDISNN-LRSPRGK 470
Query: 185 LAFLEILKHLEKINLSYNNLTTIDPQIFT--HNPKLHSLNLLGN 60
+ L+ LE +N+S N++ +DP IF+ L LN+ N
Sbjct: 471 P--ITALRQLEVLNMSRNDIYELDPLIFSGLSRNSLKELNIANN 512
Score = 31.9 bits (69), Expect = 0.096
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = -3
Query: 680 ELDISHNPLNNVFTRLLAPLEKLEYLNMGHSNLSYIGPDSFAKMTSMKRLVLSGNDLLSL 501
EL + N L N L + L+ LN+ ++ L+ I F + +K L +SGN+L +L
Sbjct: 810 ELYLVDNRLGNDCFTALEYFKCLKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNELANL 869
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 30.7 bits (66), Expect = 0.22
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = -3
Query: 308 VTTLDLSNCNITSLKVDAFKNTINLTELNLSGNRLRSNDGNLAFLEILKHLEKINLSYNN 129
VT DL+ + +F N +NL L++S N+L +L L L HL ++ + N+
Sbjct: 646 VTIRDLNAVENRLSSLTSFSNLLNLQYLDISYNQLE----DLTGLSSLIHLRELKVDSNH 701
Query: 128 LTTID 114
L ++D
Sbjct: 702 LWSLD 706
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 30.3 bits (65), Expect = 0.29
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = -3
Query: 314 SQVTTLDLSNCNITSLKVDAFKNTINLTELNLSGNRLRSNDGNLAFLEILKHLEKINLSY 135
SQ+ L S+C + S+ + F + +L L+LSGN L L L L +NL+
Sbjct: 332 SQLLYLRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYALG---ELPQLCSLNLAS 388
Query: 134 NNLT 123
N +T
Sbjct: 389 NKIT 392
Score = 30.3 bits (65), Expect = 0.29
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = -3
Query: 617 KLEYLNMGHSNLSYIGPDSFAKMTSMKRLVLSGNDLLSLEAGLFGNLTQLTTLEL 453
+L YL L I + F + S+ L LSGN+L + L G L QL +L L
Sbjct: 333 QLLYLRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYAL-GELPQLCSLNL 386
>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 409 KNTLAFKGRFKPHISNSNVVSCVRLPKRPASRDSKS 516
KN + KG+ KP + +RL ++PAS +SK+
Sbjct: 160 KNAVVEKGKSKPSKKSVKAKKKLRLAEKPASNNSKA 195
>SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 596
Score = 28.3 bits (60), Expect = 1.2
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Frame = -3
Query: 323 KQLSQVTTLDLSNCNITSLKVDAFKNTINLTELNLSGNRLRSNDGNLAFLEILKHLEKIN 144
KQ+ + + +L A N ++ ++LS N L+S + L ++
Sbjct: 187 KQMGILAEASTKSKMFPALMKVASLNFPDVISVSLSDNNLQSVTAVTTLAQTWPKLLNLS 246
Query: 143 LSYNNLTTI---DP-QIFTHNPKLHSLNLLGNPFI 51
L+ N +T++ DP T P+L L L+GNP +
Sbjct: 247 LANNRITSLSDLDPWSPKTKLPELQELVLVGNPIV 281
>SPCC4B3.05c |hem12||uroporphyrinogen decarboxylase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 27.9 bits (59), Expect = 1.6
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 371 LGSNPLVIPDKGPVFPKQLSQVTTLDL--SNCNITSLKVDAFKNTINLTELNLSG 213
LG +++ KGP FPK L +DL NI S K+ + I+LT L G
Sbjct: 83 LGMQVVMLEQKGPHFPKPLVVPEDIDLLEKTPNI-SAKLGYVMDAISLTREKLDG 136
>SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 419
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 509 ASRFQRELIFSSRSSWRTNLAQYTINYCDPYSSILIF 619
A+R +EL++ SS + A+Y++ CD IL +
Sbjct: 160 ATRHGKELLYYRASSMISGAAEYSLEECDTTPQILCY 196
>SPBC17A3.10 |pas4||peroxisomal ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 306
Score = 27.1 bits (57), Expect = 2.7
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 172 SKNAKFPSLDRNLLPDR-FSSVKFIVFLKASTLSDVILQLLKSSVVTCDSCFGNTGPLSG 348
S + K P RNLLP+ S K +V++ ++ ++L+L+ C + G+ +S
Sbjct: 124 SSSFKLPFGLRNLLPEAVISKEKHLVYI-LNSFKPILLKLVSIIRFLCLTMKGHCATVSQ 182
Query: 349 ITKGLLPSFISLKSI 393
+ GL +ISL I
Sbjct: 183 LLLGL--KYISLDEI 195
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.6 bits (56), Expect = 3.6
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -3
Query: 200 SNDGNLAFLEILK--HLEKI-NLSYNNLTTIDPQIFTHNPKLHSLNLLGNPFICDCKIAE 30
+ND ++E++K H +K+ N S T P+I HN + L L N + D + E
Sbjct: 45 ANDIKRKYIELVKKHHPDKMKNASQLAPTESPPEINKHNEEYFRLLLAANALLSDKRRRE 104
Query: 29 MWD 21
+D
Sbjct: 105 EYD 107
>SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 742
Score = 26.2 bits (55), Expect = 4.8
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = -3
Query: 275 TSLKVDAFKNTINLTELNLSGNRLRSNDGNLAFLEILKHLEKINLSYNNLTTIDPQIFTH 96
T++ V +F +T+N E L+ + AF+ +L + NL +
Sbjct: 669 TNMPVKSFFSTVNQLEETYEKKELKDISTSFAFICVLHLANEHNLELTSNEDFSDVFIRP 728
Query: 95 NPKLHSLNLLGN 60
P L +L L N
Sbjct: 729 GPNLTTLEALEN 740
>SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 396
Score = 26.2 bits (55), Expect = 4.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 555 QDDLDEKISSLWKRLAVPRSRSLR*SDATNYVRIRNVWLKTAL 427
+ + D+K+ + WKRLA+ R S S + R + W T L
Sbjct: 63 ETECDQKLRN-WKRLAIEREVSEEQSGEVQFPRWIDEWANTKL 104
>SPAC11E3.06 |map1||MADS-box transcription factor
Map1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 451 SNSNVVSCVRLPKRPASRDSKSFPER 528
S ++ S + LP PASR+ K FP++
Sbjct: 222 SQTSSSSTLNLPPEPASREVKIFPKQ 247
>SPCC1235.12c |mug146||meiotically upregulated gene
Mug46|Schizosaccharomyces pombe|chr 3|||Manual
Length = 311
Score = 25.4 bits (53), Expect = 8.3
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -3
Query: 254 FKNTINLTELNLSGNRLRSNDGNLAFLEILKHLEKINLSYNNLTTIDPQI 105
F+ N+ + L+ + D + E + HLEKI + N ++ DP +
Sbjct: 215 FEKNFNILKELLNNTKDNGIDQQIVHKEHISHLEKIWKNINEESSEDPSL 264
>SPAC186.09 |||pyruvate decarboxylase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 572
Score = 25.4 bits (53), Expect = 8.3
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -3
Query: 326 PKQLSQVTTLDLSNCNITSLKVDAFKNTINLTE--LNLSGNRLRSNDGNLAFLEILKHL 156
P S +T + SN + VD +N + + L+G +LRS AFLE+ L
Sbjct: 189 PGPASLITEPETSNQEYLQMAVDISAKIVNGKQKPVLLAGPKLRSFKAESAFLELANSL 247
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 25.4 bits (53), Expect = 8.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 505 DSKSFPERTNLFIEVILANESG 570
D+KS PE F+ +L NE+G
Sbjct: 891 DNKSTPEEREAFLRSLLENENG 912
>SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 658
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 530 LIFSSRSSWRTNLAQYTINYCDPYSSILIFLMELKVS*KHYSEDYAICL 676
L+F+S+ W N + ++ DP S LI+ E + S K D++ L
Sbjct: 407 LLFASKKYWSRNHSSHSQGNYDPLS--LIYSSEKQESIKRKMADFSFML 453
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 25.4 bits (53), Expect = 8.3
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -3
Query: 551 MTSMKRLV---LSGNDLLSLEAGLFGNLTQLTTLELEMCGLKRPLNANVFFKNLTYMDL 384
+TS + +V ++ N++ F N L LE L RP+NAN N + DL
Sbjct: 354 LTSQEAIVDMDITSNNINLSPVSHFSNGLDLQNLEEAPMNLTRPINANPHLTNHSPNDL 412
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,824,778
Number of Sequences: 5004
Number of extensions: 56827
Number of successful extensions: 214
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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