Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10k21r
(727 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 59 5e-11
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 1.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.0
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 9.0
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 58.8 bits (136), Expect = 5e-11
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 3/209 (1%)
Frame = -3
Query: 677 LDISHNPLNNVFTRL-LAPLEKLEYLNMGHSNLSYIGPDSFAKMTSMKRLVLSGNDLLSL 501
LD+S N + + L L +L+ L++ + + I D+ +T ++ S N L SL
Sbjct: 217 LDLSRNEITRLQENSPLLDLRQLQELHLQRNAIVEIAGDALTGLTVLRTFNASYNSLDSL 276
Query: 500 EAGLFGNLTQLTTLELEMCGLKRPLNANVF--FKNLTYMDLREIKLGSNPLVIPDKGPVF 327
GLF + L + L GL R L +F + L ++L +LGS+ + D+
Sbjct: 277 PEGLFASTRDLREIHLAYNGL-RDLPKGIFTRLEQLLVLNLAGNRLGSDRV---DETTFL 332
Query: 326 PKQLSQVTTLDLSNCNITSLKVDAFKNTINLTELNLSGNRLRSNDGNLAFLEILKHLEKI 147
L ++ L+LS +T + FK+ L L+L N + + N AFL L +L +
Sbjct: 333 --GLIRLIVLNLSYNMLTHIDARMFKDLFFLQILDLRNNSIDRIESN-AFLP-LYNLHTL 388
Query: 146 NLSYNNLTTIDPQIFTHNPKLHSLNLLGN 60
LS N L T+ Q+F L+ L L GN
Sbjct: 389 ELSDNKLRTVGAQLFNGLFVLNRLTLSGN 417
Score = 54.4 bits (125), Expect = 1e-09
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 1/207 (0%)
Frame = -3
Query: 677 LDISHNPLNNVFTRLLAPLEKLEYLNMGHSNLSYIGPDSFAKMTSMKRLVLSGNDLLSLE 498
L++S N L V +L L L L + + ++ I P +F + +K L LSGN+L S+
Sbjct: 388 LELSDNKLRTVGAQLFNGLFVLNRLTLSGNAIASIDPLAFRNCSDLKELDLSGNELTSVP 447
Query: 497 AGLFGNLTQLTTLELEMCGLKRPLN-ANVFFKNLTYMDLREIKLGSNPLVIPDKGPVFPK 321
L +L L TL+L G R N N F+NL L ++L N + +G ++
Sbjct: 448 DAL-RDLALLKTLDL---GENRISNFYNGSFRNLD--QLTGLRLIGNDIGNLSRGMLW-- 499
Query: 320 QLSQVTTLDLSNCNITSLKVDAFKNTINLTELNLSGNRLRSNDGNLAFLEILKHLEKINL 141
L + L+L+ + ++ AF+ + L + L GN L +D N F I L +NL
Sbjct: 500 DLPNLQILNLARNKVQHVERYAFERNMRLEAIRLDGNFL--SDINGVFTSIAS-LLLLNL 556
Query: 140 SYNNLTTIDPQIFTHNPKLHSLNLLGN 60
S N++ D N L L++ GN
Sbjct: 557 SENHIEWFDYAFIPGN--LKWLDIHGN 581
Score = 50.4 bits (115), Expect = 2e-08
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = -3
Query: 317 LSQVTTLDLSNCNITSLKVDAFKNTINLTELNLSGNRLRSNDGNLAFLEILKHLEKINLS 138
L+ + L L + I LK F+ +L EL L N L GNL FL L+ LE + LS
Sbjct: 841 LNNLQILHLEDNRIRELKGFEFERLSHLRELYLQNN-LIGFIGNLTFLP-LRSLEILRLS 898
Query: 137 YNNLTTIDPQIFTHNPKLHSLNLLGNPFICDCK-IAEMWDWAN 12
N L T T N +L L+L NP+ C CK + E+ W +
Sbjct: 899 GNRLVTFPVWQVTLNARLVELSLGSNPWSCRCKFLQELSSWVS 941
Score = 39.1 bits (87), Expect = 4e-05
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 6/215 (2%)
Frame = -3
Query: 662 NPLNNVFTRLLAPLEKLEYLNMGHSNLSYIGPDSFAKMTSMKRLVLSGNDLLSLEAGLFG 483
N + N+ +L L L+ LN+ + + ++ +F + ++ + L GN L + G+F
Sbjct: 488 NDIGNLSRGMLWDLPNLQILNLARNKVQHVERYAFERNMRLEAIRLDGNFLSDIN-GVFT 546
Query: 482 NLTQLTTLELEMCGLKRPLNANVFFKNLTYMDLREIKLGSNPLVIPDKGPVFPKQLSQVT 303
++ L L L ++ + NL ++D+ G+ I G + + S+V
Sbjct: 547 SIASLLLLNLSENHIEW-FDYAFIPGNLKWLDIH----GN---FIESLGNYYKIRDSKVK 598
Query: 302 TLDLSNCNITSLKVDAFKNTINLTELNLSG-NRLRSNDG----NLAFLEILKHL-EKINL 141
TLD S+ IT L + +++ L +N + N +R N NL +++ ++ E + L
Sbjct: 599 TLDASHNRITELSPLSVPDSVELLFINNNYINLVRPNTFTDKVNLTRVDMYANMIETMEL 658
Query: 140 SYNNLTTIDPQIFTHNPKLHSLNLLGNPFICDCKI 36
+ LT + + L + GNPF C+C +
Sbjct: 659 TSLLLTKV-----AEDRPLPEFYIGGNPFNCNCSM 688
Score = 31.5 bits (68), Expect = 0.008
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -3
Query: 317 LSQVTTLDLSNCNITSLKVDAFKNTINLTELNLSGNRLRS-ND 192
L ++ TL++ N+ +L V++ + NL LNL+ NRLR ND
Sbjct: 146 LRELHTLEIVESNVQALPVNSLCSLDNLQTLNLTENRLRDIND 188
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -3
Query: 623 LEKLEYLNMGHSNLSYIGPDSFAKMTSMKRLVLSGNDLLS 504
L L L + ++ + +IG +F + S++ L LSGN L++
Sbjct: 865 LSHLRELYLQNNLIGFIGNLTFLPLRSLEILRLSGNRLVT 904
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 563 NLAQYTINYCDPYSSIL 613
NLA I+ DPYSS+L
Sbjct: 658 NLASANISQLDPYSSLL 674
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 163 FKISKNAKFPSLDRNLLPDRFSSVKFIVFLKAST 264
+KISK + +DR L+P +V + L+ +T
Sbjct: 913 YKISKGSWETDIDRVLVPGSQQNVAGVFNLRPAT 946
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.4 bits (43), Expect = 9.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 207 ITI*RWKFGIFGNLKASREN 148
ITI RWK G+ NL +N
Sbjct: 65 ITIPRWKNGVPSNLNFFLKN 84
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,760
Number of Sequences: 438
Number of extensions: 3948
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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