Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10k21f
(594 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17) 42 3e-04
SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08) 42 5e-04
SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19) 41 7e-04
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 41 9e-04
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06) 38 0.008
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 36 0.019
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08) 36 0.025
SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06) 36 0.033
SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074) 35 0.043
SB_24803| Best HMM Match : LRR_1 (HMM E-Value=0.0066) 35 0.057
SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.075
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 33 0.13
SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13) 33 0.13
SB_13886| Best HMM Match : 7tm_1 (HMM E-Value=1e-08) 32 0.30
SB_49900| Best HMM Match : GETHR (HMM E-Value=5e-18) 32 0.40
SB_19618| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10) 31 0.53
SB_55784| Best HMM Match : CUB (HMM E-Value=3.1e-25) 31 0.70
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12) 31 0.70
SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10) 31 0.93
SB_41181| Best HMM Match : DUF164 (HMM E-Value=2.1) 31 0.93
SB_17627| Best HMM Match : F_actin_cap_B (HMM E-Value=0) 31 0.93
SB_11899| Best HMM Match : LRR_1 (HMM E-Value=1.2e-20) 31 0.93
SB_19412| Best HMM Match : LRR_1 (HMM E-Value=1.1e-06) 30 1.6
SB_56072| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_18178| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_53214| Best HMM Match : LRR_1 (HMM E-Value=7.4e-06) 29 3.7
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 28 4.9
SB_16646| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_44186| Best HMM Match : HEAT (HMM E-Value=1.8e-05) 27 8.6
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 53.6 bits (123), Expect = 1e-07
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Frame = +1
Query: 160 SFELECPDECDCH-YFRIN----WVTDCSESNLTEVPYDELSLSVYILDLNGNNITTL-- 318
S + CP C C+ R++ ++ D S S L VP + + V +L L N I+T+
Sbjct: 27 SVPITCPAYCSCYGEHRVDIYCGYLADDSFSGLRHVPRN-FPMQVSLLSLYNNLISTIHS 85
Query: 319 KPFPNDIKMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVDPEAFLDSRGLLNV 498
F N +R L + NRL+ + R F+ L L +DLS N +S + + F L ++
Sbjct: 86 NAFRNLTALRSLNLGANRLSVLPRSVFRDLASLRSLDLSANRLSSLPEDTFEGLSSLQDL 145
Query: 499 ELQDNPIGNV-EGPFLVSPTLQYLDLSNCNI 588
L N + + E F LQ L L N N+
Sbjct: 146 FLDFNRLRAIPETTFHGLAALQRLRLHNNNL 176
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Frame = +1
Query: 223 DCSESNLTEVPYDEL----SLSVYILDLNGNNITTLKPFPNDIKMRRLQIADNRLTRVER 390
D S + L+ +P D SL LD N F ++RL++ +N L
Sbjct: 122 DLSANRLSSLPEDTFEGLSSLQDLFLDFNRLRAIPETTFHGLAALQRLRLHNNNLKTFSE 181
Query: 391 EAFKGLEYLIDIDLSGNNISYVDPEAFLDSRGLLNVELQDNPIGNVEGP-FLVSPTLQYL 567
+G L + L+ N ++ ++P F + RGL + L +N I ++ F +P+L+ L
Sbjct: 182 RTLQGTLSLKSLQLNNNLLTRIEPGTFRNLRGLEILYLNNNNITELDQRLFTRTPSLKLL 241
Query: 568 DLS 576
+S
Sbjct: 242 FVS 244
>SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17)
Length = 267
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +1
Query: 331 NDIKMRRLQIADNRLTRVEREAFK--GLEYLIDIDLSGNNISYVDPEAFLDSRGLLNVEL 504
+ + + +L +A N LT + + F L L ++ L+ N I+ +D + F GL ++L
Sbjct: 75 DQVDLTKLILASNSLTEISGDVFNLPALVLLDELYLAYNKIAELDSKVFAGYSGLTVLDL 134
Query: 505 QDNPIGNVEGPFLVSPTLQYLDLSNCNIT 591
DN + ++ ++ L+ LDL+N +I+
Sbjct: 135 HDNLLTSIPEDIIILRDLERLDLTNNDIS 163
Score = 35.9 bits (79), Expect = 0.025
Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 15/132 (11%)
Frame = +1
Query: 217 VTDCSESNLTEVPYDELSL-SVYILDLNGNNITTLK-PFPNDIKMRRLQIADNRLTRVER 390
V D ++ LT +P D + L + LDL N+I+ L N ++ L + N L + R
Sbjct: 131 VLDLHDNLLTSIPEDIIILRDLERLDLTNNDISGLPYKIGNMSNLKSLVLNGNPLRELRR 190
Query: 391 EAFK-------GL---EYLIDIDLSGNNISYVDPEAFLDSRGLLNVELQDNPIGNVEGPF 540
+ GL L +DL NNIS V PE + RGL ++L NP
Sbjct: 191 DIVMIAVIDVDGLLRMSVLETLDLQNNNISQVPPE-LGNVRGLKALQLGGNPFRTPRAAI 249
Query: 541 LVSPT---LQYL 567
L T L+YL
Sbjct: 250 LAKGTQALLEYL 261
>SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08)
Length = 219
Score = 41.5 bits (93), Expect = 5e-04
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Frame = +1
Query: 283 ILDLNGNNITTLKPFPNDIKMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVDP 462
IL + +TTLK FP +R+L+++DNR++ + G L + LSGN I ++
Sbjct: 42 ILSMINVGLTTLKNFPKLPNLRKLELSDNRISS-GLQNLTGSPKLTHLSLSGNKIKDLET 100
Query: 463 -EAFLDSRGLLNVELQDNPIGNVEG----PFLVSPTLQYLD 570
E L +++L + + NV+ F + P+L+YLD
Sbjct: 101 LEPLEKLSNLKSLDLFNCEVTNVDDYKNKVFELIPSLRYLD 141
>SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19)
Length = 261
Score = 41.1 bits (92), Expect = 7e-04
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Frame = +1
Query: 286 LDLNGNNITTLKP--FPNDIKMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVD 459
L L+ N IT L F + + L++ADN + ++ AF GL L + L GN I +
Sbjct: 137 LRLSKNTITRLYKGAFESLHMLTVLELADNEIEFIDVGAFGGLFSLRTLFLGGNLIKFFS 196
Query: 460 PEAFLDSRGLLNVELQDNPIGNV-EGPFLVSPTLQYLDLSNCNI 588
+ L ++ N I + EG FL P L L +++C I
Sbjct: 197 SSTLGNLPSLTLFDISFNKIEEIEEGSFLELPNLSTLHMNDCKI 240
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 343 MRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVDPEAFLDSRGLLNVELQDNPIG 522
++RL+++ N +TR+ + AF+ L L ++L+ N I ++D AF L + L N I
Sbjct: 134 LQRLRLSKNTITRLYKGAFESLHMLTVLELADNEIEFIDVGAFGGLFSLRTLFLGGNLIK 193
Query: 523 NVEGPFLVS-PTLQYLDLS 576
L + P+L D+S
Sbjct: 194 FFSSSTLGNLPSLTLFDIS 212
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 40.7 bits (91), Expect = 9e-04
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +1
Query: 352 LQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVDPEAFLDSRGLLNVELQDNPI 519
L I +N LT V A + +++L ++DLS N ISYV AF ++ L + L +N I
Sbjct: 244 LHINNNSLTTVPLHALRKVKFLKELDLSANLISYVSSTAFANNSKLQKLLLHNNTI 299
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 286 LDLNGNNITTLKP--FPNDIKMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVD 459
LDL+ N+I+ ++ F N +++L + +N++ V FKGL L +DL N++ +
Sbjct: 98 LDLSNNDISDIQDGTFENLRYLKQLNLGENKIRTVSASMFKGLVSLEKLDLRFNDLKALP 157
Query: 460 PEAFLDSRGLLNVELQDN 513
F + L + L DN
Sbjct: 158 RGVFKPLKSLRELFLHDN 175
Score = 34.7 bits (76), Expect = 0.057
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Frame = +1
Query: 256 YDELSLS----VYILDLNGNNITTLKPFP-NDIK-MRRLQIADNRLTRVEREAFKGLEYL 417
+DE SL+ + +L +N N++TT+ +K ++ L ++ N ++ V AF L
Sbjct: 230 FDEESLACLPLLEVLHINNNSLTTVPLHALRKVKFLKELDLSANLISYVSSTAFANNSKL 289
Query: 418 IDIDLSGNNISYVDPEAFLDSRGLLNVELQDNP 516
+ L N I + +AF +GL + L+ NP
Sbjct: 290 QKLLLHNNTIRLIHEDAFSQLKGLRALFLRGNP 322
Score = 33.1 bits (72), Expect = 0.17
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 352 LQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVDPEAFLDSRGLLNVELQDNPIGNVE 531
L ++ + L ++ +F+ +YL +DLS N+IS + F + R L + L +N I V
Sbjct: 74 LTVSRSPLKLLKNTSFQDYQYLKWLDLSNNDISDIQDGTFENLRYLKQLNLGENKIRTVS 133
Query: 532 GP-FLVSPTLQYLDL 573
F +L+ LDL
Sbjct: 134 ASMFKGLVSLEKLDL 148
Score = 33.1 bits (72), Expect = 0.17
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Frame = +1
Query: 271 LSVYILDLNGNNITTLKP--FPNDIKMRRLQIADNRL--TRVEREAFKGLEYLIDIDLSG 438
+S+ LDL N++ L F +R L + DNR +R+E AF GL+ L + +S
Sbjct: 141 VSLEKLDLRFNDLKALPRGVFKPLKSLRELFLHDNRNMGSRIEEGAFNGLDNLRKLHVSA 200
Query: 439 NNISYVDPEAFLDSRGLLNVELQDNPIGNVEGPFLVS-PTLQYLDLSNCNITS 594
+ + F L +++ N I + + L P L+ L ++N ++T+
Sbjct: 201 TGMKKITQGTFGSLMSLEFLDVSFNEIRHFDEESLACLPLLEVLHINNNSLTT 253
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 38.3 bits (85), Expect = 0.005
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Frame = +1
Query: 286 LDLNGNNITTLKP--FPNDIKMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVD 459
L+L N ++ ++ F + + ++ L +A+NR+ + + +F L L +DLS N+IS+
Sbjct: 137 LNLERNRLSHIQDTTFKHLLALKVLNLANNRIYHISQGSFSDLRSLEGLDLSNNDISWTV 196
Query: 460 PEAFLDSRGLLN---VELQDNPIGNVEG-PFLVSPTLQYLDLSNCNI 588
E RGL N + L N I + FL ++YL L+ +
Sbjct: 197 EEMNGPFRGLTNLASLRLDGNRITAIAATAFLGLENIKYLWLNTSQL 243
>SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06)
Length = 239
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 337 IKMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVDPEAFLDSRGLLNVELQDN 513
+++ + ++ N L RV + F GLE L ++LS N I V+ EAF + L V+ N
Sbjct: 95 VRLMTVDLSRNLLKRVFKHYFSGLEDLKSVNLSRNVIECVEREAFEGCKALSKVDFSGN 153
Score = 35.1 bits (77), Expect = 0.043
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 2/130 (1%)
Frame = +1
Query: 148 FNGDSFELECPDECDCHYFRINWVTDCSESNLTEVPYDELSLSVYILDLNGNNITTLKP- 324
F D F+ EC + C CS L ++P + + +V L + IT LK
Sbjct: 8 FLTDGFQ-ECVFDSRCLCTSNGRSVICSSGRLDDIPAN-IPRTVGTLIVEDGQITELKKT 65
Query: 325 -FPNDIKMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVDPEAFLDSRGLLNVE 501
F + K+R L + +N+++ + L+ +DLS N + V F L +V
Sbjct: 66 SFLDLTKLRGLYLTNNKISPIFEGTITTCVRLMTVDLSRNLLKRVFKHYFSGLEDLKSVN 125
Query: 502 LQDNPIGNVE 531
L N I VE
Sbjct: 126 LSRNVIECVE 135
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 343 MRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYV 456
++ + ++ N + VEREAF+G + L +D SGN + +V
Sbjct: 121 LKSVNLSRNVIECVEREAFEGCKALSKVDFSGNRLIFV 158
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 36.3 bits (80), Expect = 0.019
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Frame = +1
Query: 181 DECDCHYFRINWVTDCSESNLTEVPYDELSLSVYILDLNGNNITTLKPFPNDIKMRRLQI 360
DE + HY + +E + E+ + ++ +L L NNI+ +K + L +
Sbjct: 21 DESNQHYLKRLTHLYLAEKGIDEIDNLSMCKNLSVLYLYDNNISKIKNLGFAGNLTHLYL 80
Query: 361 ADNRLTRVEREAFKGLEYLIDIDLSGNNISYVDPEAFLDSRGLLNVELQDNPIGNVEGPF 540
+N+++R+ E L + L GN+I+ ++ L++ L++E Q P G
Sbjct: 81 QNNKISRI--EGLDHCRRLSKLYLGGNSITVIEGLDKLENLRELHMEKQHLPPGE---KL 135
Query: 541 LVSP-TLQYLDLSNC 582
L P TLQ L C
Sbjct: 136 LFDPRTLQALSKCLC 150
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 36.3 bits (80), Expect = 0.019
Identities = 27/74 (36%), Positives = 38/74 (51%)
Frame = +1
Query: 223 DCSESNLTEVPYDELSLSVYILDLNGNNITTLKPFPNDIKMRRLQIADNRLTRVEREAFK 402
D S++ LT++P E S + L L+GN + TL K+ L +A NRL V +
Sbjct: 423 DLSDNELTDLPRKEWSPVLKTLYLSGNLLETLPDSMASAKLVNLYLARNRLYEVPACVCE 482
Query: 403 GLEYLIDIDLSGNN 444
L I +DLS NN
Sbjct: 483 LLTLEI-LDLSDNN 495
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +1
Query: 373 LTRVEREAFKGLEYLIDIDLSGNNISYVDPEAFLDSRGLLNVELQDNPIGNVEGPFLVSP 552
L ++ K + + + LS N ++ + + +D L ++LQ N + + L
Sbjct: 359 LRELDSSLLKKIRWPEKLVLSSNLLAGIS-NSIVDLDRLCRLDLQKNKLRKIPSGLLKMT 417
Query: 553 TLQYLDLSNCNIT 591
L+YLDLS+ +T
Sbjct: 418 CLKYLDLSDNELT 430
>SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)
Length = 595
Score = 35.9 bits (79), Expect = 0.025
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 325 FPNDIKMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVDPEAFLDSRGLLNVEL 504
F + + L + +N + + + AF GL+ L+ +DLS N + D + L+ L V+L
Sbjct: 52 FALPVAVESLILKNNSIRSIAKGAFNGLDKLLTLDLSSNGLQIWDVDPDLELNSLKTVKL 111
Query: 505 QDN 513
N
Sbjct: 112 YGN 114
>SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06)
Length = 575
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 352 LQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVDPEAFLDSRGLLNVELQDNPI 519
L + +N ++ + AFKGL+ L ++L NNIS + D L +EL NP+
Sbjct: 133 LTLENNSISAIAPHAFKGLDNLQSLNLRHNNISLWEGNISRDLPSLEILELDGNPV 188
>SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074)
Length = 180
Score = 35.1 bits (77), Expect = 0.043
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 175 CPDECDCHYFRINWVTDCSESNLTEVPYDELSLSVYILDLNGNNITTL--KPFPNDIKMR 348
CP C C + +CS +N T +P D + + L + I+ L F +
Sbjct: 96 CPSVCQCGERSLVKYIECSRANFTVLPND-IPVETTELYFSRTQISNLVENAFQQLPNLE 154
Query: 349 RLQIADNRLTRVEREAFKGLEYL 417
+++ +N + R+ AFKGL+ L
Sbjct: 155 IMRLPENGIKRISVNAFKGLKSL 177
>SB_24803| Best HMM Match : LRR_1 (HMM E-Value=0.0066)
Length = 727
Score = 34.7 bits (76), Expect = 0.057
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Frame = +1
Query: 205 RINWVTDCSESNLTEVPYDELSLSVYILDLNGNNITTLKPFPNDIKMRRLQIADNRLTRV 384
R+ C+ ++L V E + LDL NN+ N + +R L++ DN + +
Sbjct: 207 RVLQTLSCAHNHLPNVKEIEGCQLLENLDLRANNLLQPPSLTNHVLLRELRLDDNSICTL 266
Query: 385 EREAFKGLEYLIDIDLSGNNISYVDPEAFLDSRGLLNVELQDN----PIGN--VEGPFLV 546
E A L L + +S N + S+ + N+++ DN P GN VE PF+V
Sbjct: 267 EPLAKSWLPLLETLSVSQNRNAI--------SQDIPNLKIFDNEILTPSGNKSVETPFIV 318
>SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 34.3 bits (75), Expect = 0.075
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 223 DCSESNLTEVPYDELSLS-VYILDLNGNNITTLKPFPNDIKMRRLQIADNRLTRVEREAF 399
D S ++L ++P + + + L+LN N +TT+ P N + RL I+ NRL + F
Sbjct: 93 DFSGNSLEKLPAEIGHMEHLQTLNLNCNALTTVPPLRNAKNLARLDISHNRLESLPEGIF 152
Query: 400 KGLEYLIDIDLSGNNISYVDPE 465
LE + +I + N I + E
Sbjct: 153 -NLELIAEIYAANNLIQALGNE 173
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 33.5 bits (73), Expect = 0.13
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +1
Query: 286 LDLNGNNITTLKPFPNDI-KMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVDP 462
L LN N++ L + K+R L + N+L ++ + GL L ++ + N++S +
Sbjct: 91 LHLNENSLEELPESLGKLSKLRVLNLTGNKLEKLRDDFGAGLASLTELRIDENDLSELS- 149
Query: 463 EAFLDSRGLLNVELQDNPIGNVEGPFLVSPTLQYLDLSNCNI 588
+F + L +EL DN I + F L+ ++LS NI
Sbjct: 150 VSFTLMKNLKVLELGDNHIERLPEDFGNLRKLEVVNLSQNNI 191
Score = 32.7 bits (71), Expect = 0.23
Identities = 26/101 (25%), Positives = 47/101 (46%)
Frame = +1
Query: 286 LDLNGNNITTLKPFPNDIKMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVDPE 465
LDL+GN IT L ++K + + + +ER AF+ +GN +S++ P+
Sbjct: 280 LDLSGNRITKLPDSMGELKELKTLHLGSTINELERRAFQ----------NGNWLSHL-PD 328
Query: 466 AFLDSRGLLNVELQDNPIGNVEGPFLVSPTLQYLDLSNCNI 588
+F L + L +N + + F L++LD+ I
Sbjct: 329 SFSQMANLTKLHLDENQVVCLPDDFGDLVNLEWLDVGQNRI 369
>SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13)
Length = 335
Score = 33.5 bits (73), Expect = 0.13
Identities = 25/105 (23%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = +1
Query: 208 INWVTDCSESNLTE-VPYDELSLSVYILDLNGNNITTLKPFPNDIKMRRLQIADNRLTRV 384
+N T ++N+ E + ++ +++ LDL+ NNI ++ K++ L + +NR+T++
Sbjct: 65 VNLTTLQLDNNIIEKIEGLDMLVNLQWLDLSFNNIEVIEGLDKLTKLKDLTLYNNRITKI 124
Query: 385 EREAFKGLEYLIDIDLSGNNISYVDPEAFLDS-RGLLNVELQDNP 516
E L L + N++ +D +L + L + L NP
Sbjct: 125 EN--MDSLTNLHVFSIGNNSLKQLDNVIYLRRFKNLRTLNLSFNP 167
>SB_13886| Best HMM Match : 7tm_1 (HMM E-Value=1e-08)
Length = 536
Score = 32.3 bits (70), Expect = 0.30
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +1
Query: 313 TLKPFPNDIKMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVDPEAFLDSRGLL 492
TL F + I+ R A NR T + +EA+ DLS I Y++P F + L+
Sbjct: 10 TLVVFVSSIQQR--SDAANR-TEMLQEAYTEKSSRASGDLSDGGIDYIEPGTFRNYSNLV 66
Query: 493 NVELQDNPIGNVEGPFLVS--PTLQYLDLSNCN 585
++ L N I + E + + P+L LD++ N
Sbjct: 67 SLNLSMNRIKSFEVSNISTDLPSLAILDMTGNN 99
>SB_49900| Best HMM Match : GETHR (HMM E-Value=5e-18)
Length = 1044
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 442 NISYVDPEAFLDSRGLLNVELQDNPIGNV-EGPFLVSPTLQYL 567
NI Y+D AF +R L+ + L +NPI + EG F LQ L
Sbjct: 7 NIQYIDDFAFEKARDLVYINLANNPIEVIEEGAFATLHDLQVL 49
>SB_19618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 31.5 bits (68), Expect = 0.53
Identities = 25/78 (32%), Positives = 39/78 (50%)
Frame = +1
Query: 340 KMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVDPEAFLDSRGLLNVELQDNPI 519
K+ RL I + R ++ LE L ++ L+ N I V+ L+ L + L+DN I
Sbjct: 454 KLSRLAILELRGNKLMTTTGMNLENLRELYLAANTIRKVEGLDRLEH--LTKLHLRDNQI 511
Query: 520 GNVEGPFLVSPTLQYLDL 573
++EG LQYL+L
Sbjct: 512 DSLEGFSENMKNLQYLNL 529
>SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10)
Length = 658
Score = 31.5 bits (68), Expect = 0.53
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 286 LDLNGNNITTLKP--FPNDIKMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGN 441
L L NNI T++ F K+ L ++DNR++ E + L L+ +D+SGN
Sbjct: 97 LSLTFNNIHTIRARGFAGLNKLEYLNMSDNRISTWEIDRDTELRSLVVLDISGN 150
>SB_55784| Best HMM Match : CUB (HMM E-Value=3.1e-25)
Length = 418
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 364 DNRLTRVEREAFKGLEYLIDIDLSGNNISYVDPEAFLDSRGLLNVELQDNPIGNVE 531
+NR++ + + L+YL+ DLS N I+ ++ AF + L +L N + +E
Sbjct: 233 ENRISSLTERNYHYLQYLLHFDLSFNIITNLNARAFTNVTSLDTFDLSRNLLTKLE 288
>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
Length = 446
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +1
Query: 364 DNRLTRVEREAFKGLEYLIDIDLSGNNISYVDPEAFLDSRGLLNVELQDNPIGN 525
++ LT V E + + LI + LS N IS + + F++ L+ ++L DN +GN
Sbjct: 46 EDLLTVVPPE-LENAKALIVLSLSNNKISVIPNQLFINLIDLIYLDLSDNCLGN 98
>SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 31.1 bits (67), Expect = 0.70
Identities = 20/74 (27%), Positives = 39/74 (52%)
Frame = +1
Query: 277 VYILDLNGNNITTLKPFPNDIKMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYV 456
+ +L+L+GN + LK + ++RL ++ N LTR+ E + +L +D S N ++ +
Sbjct: 872 ITVLNLHGNGLNRLKFINSMTALKRLIVSFNELTRL--EDVNHMLFLEHLDASFNKLTTL 929
Query: 457 DPEAFLDSRGLLNV 498
+ G L+V
Sbjct: 930 EGVKGCSRLGYLDV 943
>SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10)
Length = 212
Score = 30.7 bits (66), Expect = 0.93
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = +1
Query: 262 ELSLSVYILDLNGNNITTLKPFPNDIKMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGN 441
ELS + +++ G + P P + L + DNRL+ + + F GL + ++L N
Sbjct: 88 ELSTGI-LVNCTGRRLRNF-PLPLPPRTSTLLLNDNRLSLLRYDFFLGLNNIRTLNLRRN 145
Query: 442 NISYVDPEAFLDSRGLLNVELQDNPIGNVEGP--FLVSPTLQYLDLSNCNIT 591
I ++ AF + L ++ L N + GP F LQ L L + +T
Sbjct: 146 GIKEIEFGAFRNLTALESLYLFRNRFFGI-GPNAFERLTALQVLSLVDNRLT 196
>SB_41181| Best HMM Match : DUF164 (HMM E-Value=2.1)
Length = 258
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/104 (21%), Positives = 50/104 (48%)
Frame = +1
Query: 217 VTDCSESNLTEVPYDELSLSVYILDLNGNNITTLKPFPNDIKMRRLQIADNRLTRVEREA 396
+TD E + +VP D +++ + D+ +I ++ ND+ + + + + + V +
Sbjct: 127 ITDVPEEEVNDVPVDSINVQEEMNDVPVGSI-NIQEEMNDVPVDSINVQE-EINDVPVGS 184
Query: 397 FKGLEYLIDIDLSGNNISYVDPEAFLDSRGLLNVELQDNPIGNV 528
E + D+ + G NI + +DS + E+ D P+G++
Sbjct: 185 INIQEEMNDVPVGGINIQEEVNDVPVDSIN-VQEEMNDVPVGSI 227
>SB_17627| Best HMM Match : F_actin_cap_B (HMM E-Value=0)
Length = 480
Score = 30.7 bits (66), Expect = 0.93
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = +1
Query: 265 LSLSVYILDLNGNNITTLKPFPNDIKMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNN 444
L + ILDL+ N I ++ + K+ +L + N++ R+E GLE+L ++ +
Sbjct: 329 LLIMTRILDLSFNVIKVIENLNSLTKLEKLYLVQNKIGRIE-----GLEHLTELTMVELG 383
Query: 445 ISYVDPEAFLDSRGLLNVE 501
+ + ++ +GL ++E
Sbjct: 384 ANKIRSNRIVELKGLEHLE 402
>SB_11899| Best HMM Match : LRR_1 (HMM E-Value=1.2e-20)
Length = 681
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +1
Query: 283 ILDLNGNNITTLKPFPNDIKMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYV 456
+LDL+GN I+ ++ + ++R L +A N + +V G+ L +++L N I V
Sbjct: 233 VLDLHGNRISKIENLSHLTELRVLNLAGNEILKVCN--ISGMRSLAELNLRRNKICTV 288
>SB_19412| Best HMM Match : LRR_1 (HMM E-Value=1.1e-06)
Length = 131
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 286 LDLNGNNITTLKPFPNDIKMRRLQIADNRLTRVEREAFKG 405
L L+GN IT ++P + L ++DN+L ++ +F G
Sbjct: 87 LSLHGNQITEIQPGSLPTFIETLNLSDNKLEKLSFNSFSG 126
>SB_56072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 340 KMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVDPEAFLDSR 483
K+ L + DN + +++ A + L ++DL GN++ V F S+
Sbjct: 1047 KVAVLILKDNSVAHIDQNALQAAPLLTELDLRGNDLKSVPSRMFSQSK 1094
>SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 29.1 bits (62), Expect = 2.8
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 286 LDLNGNNITTLKPFPNDIKMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNISYVDPE 465
LDL+ N I+ ++ + +R L ++ NR+ V E + L L +DLS N I V
Sbjct: 61 LDLSSNQISHIEGLTSLGYLRVLNLSCNRIYLV--EGLENLRKLTKLDLSYNFIENVSGL 118
Query: 466 AFLDSRG--LLNVELQDNPIGNVE 531
L G L + L N I ++E
Sbjct: 119 KDLHGNGYSLTTLYLHGNRIASLE 142
>SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +1
Query: 328 PNDIKMRRLQI---ADNRLTRVEREAFKGLEYLIDIDLSGNNISYVDPEAF 471
PN+IK+ + A N + ++ F GL + +DLS N I VD AF
Sbjct: 1658 PNNIKISTQDVSLFAKNDINDLKATDFSGLREIKYLDLSWNKILRVDKNAF 1708
>SB_18178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/96 (22%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = +1
Query: 211 NWVTDCSES-NLTEVPYDELSLSVY-ILDLNGNNITTLKPF-PNDIKMRRLQIADNRLTR 381
+W+ DC ++ N E + E S+ + N TT+ + P+ + + R+ +
Sbjct: 393 SWINDCKKTVNAWEKKFGEGVKSIQNTVVCYAKNTTTIPNYLPHTTTS--MYLIKKRIKQ 450
Query: 382 VEREAFKGLEYLIDIDLSGNNISYVDPEAFLDSRGL 489
++ +F+ L +DL GN I+ ++P F + L
Sbjct: 451 LQPYSFERYGDLQKLDLRGNRITTIEPFTFANLNSL 486
>SB_53214| Best HMM Match : LRR_1 (HMM E-Value=7.4e-06)
Length = 298
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 364 DNRLTRVEREA-FKGLEYLIDIDLSGNNISYVDPEAFLDSRGLLNVELQDNPIGNV 528
DNR+ + A KGL L + LS N + + FLD + L + + DN I V
Sbjct: 129 DNRINNLSNCASLKGLRRLTILYLSNNFLDSIPGGCFLDLKSLKHFFVGDNQIKKV 184
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 208 INWVTDCSESNLTEVPYDELSLSVYILDLNGNNITTLKPF-PNDIKMRRLQIADNRLTRV 384
++W+ D N ++P E +SV ++ + L+PF N ++ L +++N + +
Sbjct: 122 LDWIPD----NWFDLPNLEY-MSVDNNQIDRISYPNLEPFFQNRSQLVHLNLSNNAIESI 176
Query: 385 EREAFKGLEYLIDIDLSGNNISYV 456
EAF L +L +DL N +S +
Sbjct: 177 ASEAFSQLIHLKVLDLRHNKLSTI 200
Score = 28.3 bits (60), Expect = 4.9
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Frame = +1
Query: 274 SVYILDLNGNNITTLK--PFPNDIKMRRLQIADNRLTRVEREAFKGLEYLIDIDLSGNNI 447
S+ ILDL+ N I TLK F ++ + +N+L + L L+ +DL N I
Sbjct: 593 SIRILDLSYNEIRTLKEDAFAGLSSSYKVMLRNNKLIQSPLIPLAHLN-LVVLDLQFNQI 651
Query: 448 SYVDPEAFLDSRGLLNVELQDNPIGNV-EGPFLVSPTLQYLDLSN 579
++ GL ++ LQ+N I + + F + L L++ N
Sbjct: 652 PTINVGELNVFTGLRDLFLQNNNITELGKDLFKYNTVLGTLNIDN 696
>SB_16646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 298 GNNITTLKPFPNDIKMRRLQIADNRLTRVEREAF 399
G +T KPFP + R IAD L ++ R+ F
Sbjct: 99 GQTVTLWKPFPVLPPLERGIIADELLNKISRDVF 132
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 474 GFPRFAKRGASRQSNRQRRRPLPRL 548
G P++ G R + R+RPLPRL
Sbjct: 22 GVPKYRSVGCYRDTQEGRQRPLPRL 46
>SB_44186| Best HMM Match : HEAT (HMM E-Value=1.8e-05)
Length = 872
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 241 GYSLNSP*PS*F*SSGSRTRPGTPARSC 158
G +SP F SSGS RPG+P+ +C
Sbjct: 623 GQHCHSPVSPYFTSSGSPPRPGSPSMTC 650
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,521,635
Number of Sequences: 59808
Number of extensions: 342371
Number of successful extensions: 924
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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