BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10k19r (566 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY062204-1|AAL58565.1| 150|Anopheles gambiae cytochrome P450 CY... 27 0.32 AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 24 3.0 DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 23 5.3 AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 23 5.3 AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 23 5.3 AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 23 5.3 AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 23 5.3 AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 23 5.3 AY187042-1|AAO39756.1| 248|Anopheles gambiae putative antennal ... 23 6.9 AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 23 6.9 L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier prot... 23 9.2 L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier prot... 23 9.2 >AY062204-1|AAL58565.1| 150|Anopheles gambiae cytochrome P450 CYP4C28 protein. Length = 150 Score = 27.5 bits (58), Expect = 0.32 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = +3 Query: 327 LWCKVERNLRVFPFLEVAQSTVNTGVNSDLVH 422 L C ++ +LR+FP + + T+ TGV+ + H Sbjct: 61 LECCIKESLRLFPSIPILSRTLTTGVDIEGHH 92 >AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel protein. Length = 574 Score = 24.2 bits (50), Expect = 3.0 Identities = 12/40 (30%), Positives = 16/40 (40%) Frame = -1 Query: 251 NADACTLTSCPTEAGKTQTLDFSLHIGKKLPTGNFEFKWK 132 N A PT+A + D+ LH G+ F K K Sbjct: 493 NTTAIQFLGRPTDADRYDAHDYHLHTGRNAMVKEFATKLK 532 >DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 protein. Length = 961 Score = 23.4 bits (48), Expect = 5.3 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = -2 Query: 139 NGSFGMKTMRARCAATERMSGLFSKHKKQ 53 + S G K R+RC ATE S L K+ Sbjct: 838 HASRGAKPHRSRCEATEARSHLADSQVKK 866 >AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific transcription factor FRU-MA protein. Length = 960 Score = 23.4 bits (48), Expect = 5.3 Identities = 8/19 (42%), Positives = 14/19 (73%) Frame = +2 Query: 239 KRQHCREHQKEFQRHSSTQ 295 ++QH HQ++ Q+H S+Q Sbjct: 256 QQQHPSSHQQQSQQHPSSQ 274 >AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific transcription factor FRU-MB protein. Length = 759 Score = 23.4 bits (48), Expect = 5.3 Identities = 8/19 (42%), Positives = 14/19 (73%) Frame = +2 Query: 239 KRQHCREHQKEFQRHSSTQ 295 ++QH HQ++ Q+H S+Q Sbjct: 256 QQQHPSSHQQQSQQHPSSQ 274 >AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-specific zinc-fingerC isoform protein. Length = 593 Score = 23.4 bits (48), Expect = 5.3 Identities = 8/19 (42%), Positives = 14/19 (73%) Frame = +2 Query: 239 KRQHCREHQKEFQRHSSTQ 295 ++QH HQ++ Q+H S+Q Sbjct: 208 QQQHPSSHQQQSQQHPSSQ 226 >AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-specific zinc-fingerC isoform protein. Length = 569 Score = 23.4 bits (48), Expect = 5.3 Identities = 8/19 (42%), Positives = 14/19 (73%) Frame = +2 Query: 239 KRQHCREHQKEFQRHSSTQ 295 ++QH HQ++ Q+H S+Q Sbjct: 256 QQQHPSSHQQQSQQHPSSQ 274 >AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling promoter protein. Length = 1197 Score = 23.4 bits (48), Expect = 5.3 Identities = 10/15 (66%), Positives = 10/15 (66%) Frame = +2 Query: 92 CSSTSGSHCLHSKAS 136 CSSTS SH HS S Sbjct: 1090 CSSTSSSHSNHSSHS 1104 >AY187042-1|AAO39756.1| 248|Anopheles gambiae putative antennal carrier protein TOL-2 protein. Length = 248 Score = 23.0 bits (47), Expect = 6.9 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +1 Query: 139 LNSKFPVGSFFPICKLKSKV*VLP 210 +N + PV S K+K KV +LP Sbjct: 111 MNLRLPVASLVGSYKIKGKVLILP 134 >AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 precursor protein. Length = 1623 Score = 23.0 bits (47), Expect = 6.9 Identities = 11/30 (36%), Positives = 14/30 (46%) Frame = -2 Query: 370 RKGKTRRFLSTLHHNSPQLNSRPASLG*RM 281 R T+ LHH + QLN R A R+ Sbjct: 1461 RANATKNTARDLHHEADQLNGRLAKTDNRL 1490 >L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier protein protein. Length = 301 Score = 22.6 bits (46), Expect = 9.2 Identities = 13/41 (31%), Positives = 18/41 (43%) Frame = -1 Query: 269 PFDALYNADACTLTSCPTEAGKTQTLDFSLHIGKKLPTGNF 147 PFD + C +E TLD + IGK+ +G F Sbjct: 232 PFDTVRRRMMMQSWPCKSEVMYKNTLDCWVKIGKQEGSGAF 272 >L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier protein protein. Length = 301 Score = 22.6 bits (46), Expect = 9.2 Identities = 13/41 (31%), Positives = 18/41 (43%) Frame = -1 Query: 269 PFDALYNADACTLTSCPTEAGKTQTLDFSLHIGKKLPTGNF 147 PFD + C +E TLD + IGK+ +G F Sbjct: 232 PFDTVRRRMMMQSWPCKSEVMYKNTLDCWVKIGKQEGSGAF 272 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 635,887 Number of Sequences: 2352 Number of extensions: 12474 Number of successful extensions: 41 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 41 length of database: 563,979 effective HSP length: 61 effective length of database: 420,507 effective search space used: 53404389 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -