Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k19f
         (605 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.50 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.0  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   3.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   4.6  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    22   4.6  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    22   4.6  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   4.6  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   6.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   6.1  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.0 bits (52), Expect = 0.50
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 265 GLFGLKNGAEIPFDALYNADACTLTSCPTEAGKTQTLDFSLHIGKK 402
           G+ G+KN +   FD ++ +  CT   C  EA KT  L + + I ++
Sbjct: 136 GIVGVKNASLFIFDLIFLSFRCT-KLC-KEANKTAFLWYHIKIDRE 179


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 173 LTVDCATSRKGKTRRFLSTLHHNSPQLNSR 262
           LT +CAT  +      + TLHH+  +L +R
Sbjct: 562 LTKNCATKAQSVVLGRICTLHHHLSKLVTR 591


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -3

Query: 591  LFYQECVSHFLCRYIHSVFTMQSVS--SCFLCLLNKPDIRSV 472
            ++Y    S +L   I+SVF M +VS  +  + ++ KPD  +V
Sbjct: 1007 IYYVTVPSMYLLLVIYSVFNMNNVSWGTREVTVVPKPDPNAV 1048


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -3

Query: 591  LFYQECVSHFLCRYIHSVFTMQSVS--SCFLCLLNKPDIRSV 472
            ++Y    S +L   I+SVF M +VS  +  + ++ KPD  +V
Sbjct: 1007 IYYVTVPSMYLLLVIYSVFNMNNVSWGTREVTVVPKPDPNAV 1048


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 23  ACTTWLSTLRCYSLHSSAVV*LNSTSSPQGYAGKWTPARVL 145
           A  T+ ST   Y L + ++   ++ + P  ++G W  ARVL
Sbjct: 127 AVVTYSST---YVLVALSIDRYDAITHPMNFSGSWKRARVL 164


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 188 HSRLLTQGSIRTSFTVHALASTSRHS 111
           +SRL+  GS R  F V  +    RH+
Sbjct: 723 YSRLVGDGSARRRFVVAVVGFLRRHN 748


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 458 LSLSSFQSFHLNSKFPVGSFFPI 390
           L+L + QS    SKF    FFP+
Sbjct: 341 LALLAQQSTSRTSKFSAAGFFPV 363


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 179 VDCATSRKGKTRRFLSTLHHN 241
           + CA +  GKT  F+  + HN
Sbjct: 199 MSCAQTGSGKTAAFMLPIIHN 219


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 479 RMSGLFSKHKKQLLTDCIVNTLCMY 553
           R+SGL  K K  LL D +    C Y
Sbjct: 9   RVSGLDKKSKYILLMDIVAADDCRY 33


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 479 RMSGLFSKHKKQLLTDCIVNTLCMY 553
           R+SGL  K K  LL D +    C Y
Sbjct: 9   RVSGLDKKSKYILLMDIVAADDCRY 33


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 100 VTTRLCREVDASACTVNEVRIDPCVNSRLCHLKK 201
           +T +   E  A   T+N  R+ P + S LC +K+
Sbjct: 50  ITDQSLDEAQARKHTLNCHRMKPALFSVLCEIKE 83


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 529 AICEQLFFVFTKQA*HSFCSS 467
           +ICE  + +F +   H+ C S
Sbjct: 67  SICEDCYMLFREPQLHNLCRS 87


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/40 (22%), Positives = 22/40 (55%)
 Frame = +1

Query: 142 TVNEVRIDPCVNSRLCHLKKGKNAKVSFDFTPQFSTTKLK 261
           +V+    +P ++  L +L   K  ++    +P F+++K+K
Sbjct: 62  SVSNTNTEPLLSEALTNLPGEKWKEMRATLSPAFTSSKIK 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,513
Number of Sequences: 336
Number of extensions: 3306
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)