Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k18r
         (769 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q50400 Cluster: Azurin precursor; n=5; Proteobacteria|R...    35   2.6  
UniRef50_UPI00005A082A Cluster: PREDICTED: similar to catechol-O...    34   3.4  
UniRef50_O15234 Cluster: Protein CASC3; n=26; Tetrapoda|Rep: Pro...    34   3.4  

>UniRef50_Q50400 Cluster: Azurin precursor; n=5; Proteobacteria|Rep:
           Azurin precursor - Methylobacillus flagellatus (strain
           KT / ATCC 51484 / DSM 6875)
          Length = 148

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = -2

Query: 681 ALALVRPPTAPLAPCQLNLSAPEATAFAVRLIDVKESLSDWERGFTELQASGAAG 517
           ALA +    A  + C++N+SA ++ AF  R ID+ +S  ++   F     +  AG
Sbjct: 8   ALAFIPTIAAAASNCEVNVSAGDSMAFNTRSIDIPKSCKEFTVNFAHTGTASKAG 62


>UniRef50_UPI00005A082A Cluster: PREDICTED: similar to
           catechol-O-methyltransferase domain containing 1; n=4;
           Eutheria|Rep: PREDICTED: similar to
           catechol-O-methyltransferase domain containing 1 - Canis
           familiaris
          Length = 434

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -2

Query: 723 KKDLGLNSATG-TALALALVRPPTAPLAPCQLNLSAPE 613
           KK L L + TG +ALALAL  PP   +  C++N   PE
Sbjct: 276 KKALDLGTFTGYSALALALALPPAGRVVTCEVNPGPPE 313


>UniRef50_O15234 Cluster: Protein CASC3; n=26; Tetrapoda|Rep:
           Protein CASC3 - Homo sapiens (Human)
          Length = 703

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = -3

Query: 605 LLPFDLLMLRNHCPIGSGASPSFRRQEPPAASGARGLQLT--HKTPLPTKQRPPI 447
           L P +L  + NH  +G+G  P F R E     G R  + +   + P+P    PP+
Sbjct: 484 LQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPV 538


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,079,462
Number of Sequences: 1657284
Number of extensions: 13253970
Number of successful extensions: 41238
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 39463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41214
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)