Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k18r
         (769 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X80199-1|CAC27699.1|  703|Homo sapiens MLN51 protein.                  34   0.49 
BC050526-1|AAH50526.1|  703|Homo sapiens cancer susceptibility c...    34   0.49 
BC044656-1|AAH44656.1|  703|Homo sapiens cancer susceptibility c...    34   0.49 
AB065626-1|BAC05852.1|  328|Homo sapiens seven transmembrane hel...    31   6.0  

>X80199-1|CAC27699.1|  703|Homo sapiens MLN51 protein.
          Length = 703

 Score = 34.3 bits (75), Expect = 0.49
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = -3

Query: 605 LLPFDLLMLRNHCPIGSGASPSFRRQEPPAASGARGLQLT--HKTPLPTKQRPPI 447
           L P +L  + NH  +G+G  P F R E     G R  + +   + P+P    PP+
Sbjct: 484 LQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPV 538


>BC050526-1|AAH50526.1|  703|Homo sapiens cancer susceptibility
           candidate 3 protein.
          Length = 703

 Score = 34.3 bits (75), Expect = 0.49
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = -3

Query: 605 LLPFDLLMLRNHCPIGSGASPSFRRQEPPAASGARGLQLT--HKTPLPTKQRPPI 447
           L P +L  + NH  +G+G  P F R E     G R  + +   + P+P    PP+
Sbjct: 484 LQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPV 538


>BC044656-1|AAH44656.1|  703|Homo sapiens cancer susceptibility
           candidate 3 protein.
          Length = 703

 Score = 34.3 bits (75), Expect = 0.49
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = -3

Query: 605 LLPFDLLMLRNHCPIGSGASPSFRRQEPPAASGARGLQLT--HKTPLPTKQRPPI 447
           L P +L  + NH  +G+G  P F R E     G R  + +   + P+P    PP+
Sbjct: 484 LQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPV 538


>AB065626-1|BAC05852.1|  328|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 328

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = -1

Query: 103 FLILIVVFFSSLIEDC**VIIIESDCNYH--MYFII 2
           FL+L V+F  S+ E+   +++I SD   H  MYF++
Sbjct: 28  FLVLFVIFIMSVTENTLMILLIRSDSRLHTPMYFLL 63


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,855,680
Number of Sequences: 237096
Number of extensions: 2004577
Number of successful extensions: 5597
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5597
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)