Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k18f
         (632 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X80199-1|CAC27699.1|  703|Homo sapiens MLN51 protein.                  31   2.6  
BC050526-1|AAH50526.1|  703|Homo sapiens cancer susceptibility c...    31   2.6  
BC044656-1|AAH44656.1|  703|Homo sapiens cancer susceptibility c...    31   2.6  
DQ201778-1|ABG24242.1|  392|Homo sapiens PMCA2i protein.               30   7.8  

>X80199-1|CAC27699.1|  703|Homo sapiens MLN51 protein.
          Length = 703

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +2

Query: 479 LLPFDLLMLRNHCPIGSGASPSFRRQEPPAASGARGLQLTHKTPLPTXQRP 631
           L P +L  + NH  +G+G  P F R E     G R  + + +   P  + P
Sbjct: 484 LQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPP 534


>BC050526-1|AAH50526.1|  703|Homo sapiens cancer susceptibility
           candidate 3 protein.
          Length = 703

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +2

Query: 479 LLPFDLLMLRNHCPIGSGASPSFRRQEPPAASGARGLQLTHKTPLPTXQRP 631
           L P +L  + NH  +G+G  P F R E     G R  + + +   P  + P
Sbjct: 484 LQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPP 534


>BC044656-1|AAH44656.1|  703|Homo sapiens cancer susceptibility
           candidate 3 protein.
          Length = 703

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +2

Query: 479 LLPFDLLMLRNHCPIGSGASPSFRRQEPPAASGARGLQLTHKTPLPTXQRP 631
           L P +L  + NH  +G+G  P F R E     G R  + + +   P  + P
Sbjct: 484 LQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPP 534


>DQ201778-1|ABG24242.1|  392|Homo sapiens PMCA2i protein.
          Length = 392

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = -1

Query: 284 NPRTMFLITENSHALNKTYNTNCVHCKKKLTAQHAHGNFHESLQRF--FLLTLRII 123
           N +TM L+  N+ A+N  Y T  +  +K+       GN ++S+ +F  F LT+ ++
Sbjct: 24  NTKTMELLI-NAIAINSAYTTKILPPEKEGALPRQVGNVYDSISKFLQFQLTVNVV 78


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,678,822
Number of Sequences: 237096
Number of extensions: 1925259
Number of successful extensions: 5356
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5356
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)