Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k18f
         (632 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069289-1|AAL39434.1| 1137|Drosophila melanogaster GM14421p pro...    31   1.3  
AE014298-2419|AAF48620.1| 1137|Drosophila melanogaster CG9902-PA...    31   1.3  
AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD1916...    29   6.9  
AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA, ...    29   6.9  
BT001488-1|AAN71243.1|  309|Drosophila melanogaster LD24318p pro...    28   9.1  
AE014297-4462|AAF56958.1|  309|Drosophila melanogaster CG15514-P...    28   9.1  

>AY069289-1|AAL39434.1| 1137|Drosophila melanogaster GM14421p
           protein.
          Length = 1137

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -1

Query: 404 ARAVPVAEFSPKSFLFVRPHSRLELFALASEWRTSK 297
           AR +   EFS K F+F   HS L++F L  + R S+
Sbjct: 19  ARKLEYDEFSAKMFVFCNKHSALDVFELMGDDRLSQ 54


>AE014298-2419|AAF48620.1| 1137|Drosophila melanogaster CG9902-PA
           protein.
          Length = 1137

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -1

Query: 404 ARAVPVAEFSPKSFLFVRPHSRLELFALASEWRTSK 297
           AR +   EFS K F+F   HS L++F L  + R S+
Sbjct: 19  ARKLEYDEFSAKMFVFCNKHSALDVFELMGDDRLSQ 54


>AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD19168
           protein.
          Length = 1260

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -1

Query: 527 SQSDNDSLTSISRTAKAVASGADRFS*QGASGAVGGLT-KARARAV 393
           S+S  DS  S S ++ A  S +D    +GA GAVG  T + + RA+
Sbjct: 401 SESSADSSESSSSSSTASDSSSDNEDGEGAGGAVGSPTNRLKHRAI 446


>AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA,
           isoform A protein.
          Length = 1260

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -1

Query: 527 SQSDNDSLTSISRTAKAVASGADRFS*QGASGAVGGLT-KARARAV 393
           S+S  DS  S S ++ A  S +D    +GA GAVG  T + + RA+
Sbjct: 401 SESSADSSESSSSSSTASDSSSDNEDGEGAGGAVGSPTNRLKHRAI 446


>BT001488-1|AAN71243.1|  309|Drosophila melanogaster LD24318p
           protein.
          Length = 309

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -1

Query: 248 HALNKTYNTNCVHCKKKLTAQHAHGNFHESLQRFFLLTLRII 123
           H L + Y   C HC+K L+++H   N    L R   L  R I
Sbjct: 13  HRLTE-YIVQCKHCEKTLSSKHTSSNLTRHLIRNHKLLARSI 53


>AE014297-4462|AAF56958.1|  309|Drosophila melanogaster CG15514-PA
           protein.
          Length = 309

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -1

Query: 248 HALNKTYNTNCVHCKKKLTAQHAHGNFHESLQRFFLLTLRII 123
           H L + Y   C HC+K L+++H   N    L R   L  R I
Sbjct: 13  HRLTE-YIVQCKHCEKTLSSKHTSSNLTRHLIRNHKLLARSI 53


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,072,895
Number of Sequences: 53049
Number of extensions: 607075
Number of successful extensions: 2269
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2269
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)