Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10k16r
(679 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 8e-12
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_18389| Best HMM Match : Ferritin (HMM E-Value=2.8e-26) 47 1e-05
SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021) 42 3e-04
SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 33 0.28
SB_30241| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_33587| Best HMM Match : SAMP (HMM E-Value=2.7) 30 2.0
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 30 2.0
SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 30 2.0
SB_39157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_24255| Best HMM Match : Herpes_PAP (HMM E-Value=2) 29 3.5
SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1) 29 4.6
SB_26677| Best HMM Match : AT_hook (HMM E-Value=3.1) 28 6.0
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0) 28 6.0
SB_29682| Best HMM Match : PKD_channel (HMM E-Value=0.0011) 28 6.0
SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7) 28 8.0
SB_17318| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 67.7 bits (158), Expect = 8e-12
Identities = 43/124 (34%), Positives = 63/124 (50%)
Frame = -3
Query: 674 DAATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTN 495
+A+ EEREHA KL + L RG G + L + P W G ++ AL LE V
Sbjct: 187 EASHEEREHAEKLAKFQLQRG---GRIV-LQDIKRPERDDWGCGQDVIQAALDLEKHVNQ 242
Query: 494 SIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFD 315
++ ++ K E D + D+L +L EQ + ++LAG + LK++ LGEF FD
Sbjct: 243 ALHDLHKVAE-KHGDSQMQDWLESHYLTEQVEAIKELAGHMTNLKRV---GPGLGEFQFD 298
Query: 314 KKLL 303
K L
Sbjct: 299 KHTL 302
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 67.3 bits (157), Expect = 1e-11
Identities = 44/123 (35%), Positives = 63/123 (51%)
Frame = -3
Query: 671 AATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNS 492
A+ EEREHA KL + L RG G + L + P W G A++ AL LE V +
Sbjct: 173 ASHEEREHAEKLAKFQLQRG---GRIV-LQDIKRPERDDWGCGQDAIQAALDLEKHVNQA 228
Query: 491 IREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDK 312
+ ++ K E D + D+L +L EQ + ++LAG + LK++ LGEF FDK
Sbjct: 229 LLDLHKVAEKH-GDSQMQDWLESHYLTEQVEAIKELAGHLTNLKRV---GPGLGEFQFDK 284
Query: 311 KLL 303
L
Sbjct: 285 LTL 287
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 64.5 bits (150), Expect = 8e-11
Identities = 40/124 (32%), Positives = 65/124 (52%)
Frame = -3
Query: 671 AATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNS 492
A+ EEREHA KL+ + RG G + L + P W G +++ AL LE V +
Sbjct: 241 ASHEEREHAEKLMKFQNERG---GRIV-LQDIKKPEKDEWGCGMDSIQVALDLEKHVNQA 296
Query: 491 IREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDK 312
+ ++ K E D + D++ G FL EQ + ++LAG + LK++ LGE+ +D
Sbjct: 297 LLDLHKIAEKH-GDAQMTDFIEGNFLTEQVEAIKELAGHLTNLKRV---GPGLGEYQYDH 352
Query: 311 KLLG 300
+ +G
Sbjct: 353 ETIG 356
Score = 59.3 bits (137), Expect = 3e-09
Identities = 40/124 (32%), Positives = 64/124 (51%)
Frame = -3
Query: 671 AATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNS 492
AA EE HA +++L RG G V L P W +G A+ AL LE ++ ++
Sbjct: 21 AAEEEYTHAHMFMEFLNKRG---GRVK-LHHIMKPCRDHWGNGLMAMRDALYLEKEINHA 76
Query: 491 IREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDK 312
+ ++ + +++ D + D+L FL EQ + LA STL+++ LGE+ FDK
Sbjct: 77 LLDLHQVADTN-RDPQVQDFLESNFLGEQVDSIKTLANYVSTLQRL---GGGLGEYQFDK 132
Query: 311 KLLG 300
+ LG
Sbjct: 133 ETLG 136
>SB_18389| Best HMM Match : Ferritin (HMM E-Value=2.8e-26)
Length = 175
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/124 (28%), Positives = 65/124 (52%)
Frame = -3
Query: 677 FDAATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVT 498
+ + EEREH K+ Y+ G + +VT ++ + S E AL+ E VT
Sbjct: 53 YKQSEEEREHFLKVFKYITEMGGI--AVTPSVS---EVQQEFASFREVFEIALQNEIAVT 107
Query: 497 NSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIF 318
+++ +VI C NDY +++ ++ EQ + +R+ A +A L ++D+ +A G+F
Sbjct: 108 HAVNKVIAKCRQE-NDYATEEFMMW-YVKEQREEERN-ARRALELFDLIDEDSATGKFQL 164
Query: 317 DKKL 306
DK++
Sbjct: 165 DKEI 168
>SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021)
Length = 73
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = -3
Query: 671 AATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNS 492
A+ EEREHA KL + L RG G + L + P W G A++ AL LE V +
Sbjct: 3 ASHEEREHAEKLAKFQLQRG---GRIV-LQDIKRPERDDWGCGQDAIQAALDLEKHVNQA 58
Query: 491 IREVIKTCE 465
+ ++ K E
Sbjct: 59 LHDLHKVAE 67
>SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 37.1 bits (82), Expect = 0.013
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = -3
Query: 671 AATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVT 498
A+ EEREHA KL + L RG G + L + P W G A++ AL LE+ T
Sbjct: 56 ASHEEREHAEKLAKFQLQRG---GRIV-LQDIKRPERDDWGCGQDAIQAALDLENTST 109
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -3
Query: 551 ESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLS 426
ES A+ LEH L+ E++ N +R+ T SS N+Y V+YL+
Sbjct: 1823 ESKAADLEHRLETEANDKNKLRQENITLASSLNEYK-VNYLT 1863
>SB_30241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 30.3 bits (65), Expect = 1.5
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Frame = -2
Query: 543 RISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLFVRGIPRRT---------VQGPT 391
R PR RP + ++ HQ+ R + +R PP RG PR++ QG
Sbjct: 53 RRRPRPRPNSEGKEGEEADHEHQEERPRGRRPPPWWRRRRGPPRKSDSAEHSGADSQGEG 112
Query: 390 RPRRQGLDPQEDDGQTRRPRRVHLRQ-ETPRIE 295
+++G +E + + RRPRR R+ PR E
Sbjct: 113 N-KQEGSAEEEREQRPRRPRRPRFRKSRQPRSE 144
>SB_33587| Best HMM Match : SAMP (HMM E-Value=2.7)
Length = 488
Score = 29.9 bits (64), Expect = 2.0
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = -2
Query: 600 LRNRPHHVQGPRKHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLFV-R 424
LR P RKH+ RR P +PQ E P ++ L R PP + V
Sbjct: 418 LRESPQCESVARKHM--PRRSPPAYKPQLKE-----SPKVNRIRDAHLLRPPPPLVRVAE 470
Query: 423 GIPRRTVQGPTRPRRQG 373
+PR T PT RRQG
Sbjct: 471 DVPRNTDTSPTLSRRQG 487
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 630 LPAHEGKADRLRNRPHHVQGP-RKHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQ 454
LP E + +R RP + RK + ER +P E ++ + +
Sbjct: 271 LPEVEPEEERATPRPTKAKPTTRKRMPTERPTKKPTKPLLPEEEEEEEEEEEERPTPRPT 330
Query: 453 RLPPGRLFVRGIPRRTVQGPTRPRRQGLDPQEDDGQTRRPRR 328
+ P + +R R + PT+P ++P+E++ T RP +
Sbjct: 331 KAKPTAI-IRKPTERPTKKPTKPLLPEVEPEEEERATPRPTK 371
>SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 344
Score = 29.9 bits (64), Expect = 2.0
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Frame = -2
Query: 612 KADRLRNRPHHVQGPRKHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRL 433
K R NR Q RK + + S + + QAG P H+ Q P +
Sbjct: 229 KTKRQANRKTKRQANRKT---KGQASHKTKGQAGRKIKISKPQNHKQAPRPRQASPKTK- 284
Query: 432 FVRGIPRRTVQGPTRPRRQG-----LDPQEDDGQTRRPRRVHLRQETPR 301
+ P+ P RPR+ PQ+ D Q RPR+ L+ +T +
Sbjct: 285 -GQASPKTKSTKPARPRQASPKAKTSKPQDQDKQVARPRQSSLKTKTSK 332
>SB_39157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = -3
Query: 491 IREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTL--KKMMDKHAALGEFIF 318
+R V T E ++D H DY S YKG + L K K L EF F
Sbjct: 6 VRVVSDTVELLWSDGHATDYKSSWLAQHAYKGNKKLRVKEELFLWDKERINSTTLPEFSF 65
Query: 317 D 315
D
Sbjct: 66 D 66
>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = -2
Query: 576 QGPRKHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLFVRGIPRRTVQG 397
QGP ++ P +P + ++Q PGG Q ++ PP +G P+R
Sbjct: 449 QGPPSQSTPSQQAPPTKQPMQPQHQYQARPGG----PPQQRQYPPSSTPQQGFPQRPGSP 504
Query: 396 PT 391
PT
Sbjct: 505 PT 506
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 29.1 bits (62), Expect = 3.5
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Frame = -2
Query: 573 GPRKHVVGERRISPR-ARPQAGE*RHQQHPGGHQ------DLREQLQRLPPGRLFVRGIP 415
G R V+ + RISP AR ++ E R P Q +RE R + F
Sbjct: 1587 GLRPEVIADSRISPYDARVKSVEQRPDPQPHRDQRRDVIKGIRESEHRFTDPQSFTHHDS 1646
Query: 414 RRTV-QG-PTRPRRQGLDPQEDDGQTRRPRRVHLRQETPRIERI 289
R+ + QG P R +PQ+ + R R V ++ R+ERI
Sbjct: 1647 RQDLHQGVPVADSRHRSEPQQANEVERTERPVITLEQERRVERI 1690
>SB_24255| Best HMM Match : Herpes_PAP (HMM E-Value=2)
Length = 919
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = -3
Query: 521 LKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKH 342
L+LE +VT S+R+ +S+F+ V GE D Q +A ++ +H
Sbjct: 557 LRLEGEVTISLRK-----QSTFSSLAQVRIFIGE--DPTSSRQPSYRVQAPATTWILKQH 609
Query: 341 AALGEFIFDK 312
+L EFIFD+
Sbjct: 610 ESLSEFIFDE 619
>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1283
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = -2
Query: 606 DRL-RNRPHHVQGPRKHVVGERRISPRARP---QAGE*RHQQHPGGHQDL 469
DRL +RP + G +H+ R P P G HQ HP GHQ +
Sbjct: 951 DRLTHDRPGLIMGQDRHMADYRE--PHREPGGVHEGPFPHQPHPNGHQPM 998
>SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1)
Length = 682
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = -2
Query: 606 DRL-RNRPHHVQGPRKHVVGERRISPRARP---QAGE*RHQQHPGGHQDL 469
DRL +RP + G +H+ R P P G HQ HP GHQ +
Sbjct: 84 DRLTHDRPGLIMGQDRHMADYRE--PHREPGGVHEGPFPHQPHPNGHQPM 131
>SB_26677| Best HMM Match : AT_hook (HMM E-Value=3.1)
Length = 355
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 381 RQGLDPQEDDGQTRRPRRVHLRQETPR 301
R+ PQ+ D Q RPR+ RQ PR
Sbjct: 41 RKTSKPQDQDKQAARPRQARTRQARPR 67
>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 937
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 586 SSRTGPPQTRRGRAAHQPSSTPSS 515
++RTGPPQ+R+ H+ S+T S
Sbjct: 419 ANRTGPPQSRQAVPRHRTSATADS 442
>SB_29682| Best HMM Match : PKD_channel (HMM E-Value=0.0011)
Length = 318
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -3
Query: 503 VTNSIREVIKTCESSFNDYHLVDYLSGEFLDE 408
+ ++ EV E NDY ++DY+ +F ++
Sbjct: 187 INEALEEVSSDAEKQANDYEIIDYMMHKFKEQ 218
>SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 390 RPRRQGLDPQEDDGQTRRPRRVHLR 316
RPR+ PQ+ D Q RPR+ L+
Sbjct: 41 RPRQASRKPQDQDKQAARPRQASLK 65
>SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7)
Length = 567
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/99 (20%), Positives = 43/99 (43%)
Frame = -2
Query: 597 RNRPHHVQGPRKHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLFVRGI 418
+N+P +Q K R+ S + + + + +Q Q R+ + R +
Sbjct: 95 KNKPSKLQDQAKQ--DARQASRKTKTSKPQDQDKQAARPRQASRKPQDKQAASRKTSKPQ 152
Query: 417 PRRTVQGPTRPRRQGLDPQEDDGQTRRPRRVHLRQETPR 301
++ + P+R + PQ+ D Q RPR+ +++T +
Sbjct: 153 DKQAARQPSRKTKTS-KPQDQDKQAERPRQASRKKKTSK 190
>SB_17318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 584 ITYRAPANTSWESGASALEHALKLESD 504
+TY + +W SG L H++K++ D
Sbjct: 164 VTYHCLNSAAWSSGKGDLNHSIKIKGD 190
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,747,090
Number of Sequences: 59808
Number of extensions: 421912
Number of successful extensions: 1201
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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