Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k16r
         (679 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    30   0.077
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   2.2  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              25   2.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   3.8  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 29.9 bits (64), Expect = 0.077
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 552 GERRISPRARPQAGE*RHQQHPGGHQDLREQLQR 451
           GER + P+ R Q  + +HQQ     Q  R+Q QR
Sbjct: 294 GERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQR 327



 Score = 24.6 bits (51), Expect = 2.9
 Identities = 17/70 (24%), Positives = 33/70 (47%)
 Frame = -2

Query: 477 QDLREQLQRLPPGRLFVRGIPRRTVQGPTRPRRQGLDPQEDDGQTRRPRRVHLRQETPRI 298
           Q  ++Q Q+   G  +V    R+  Q     ++Q   PQ+   Q +RP++   +Q  P  
Sbjct: 436 QQQQQQQQQQQQGERYVPPQLRQQRQQQQPQQQQQQRPQQQRPQQQRPQQQRSQQRKP-- 493

Query: 297 ERINILHVTP 268
            +  ++ V+P
Sbjct: 494 AKPELIEVSP 503


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = -3

Query: 563 NTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYK 399
           NT     ASA   A++  + V    +E      S  ND+++ D++SG   + + K
Sbjct: 828 NTITYGTASAPFLAIRTLNQVLEDNKEKYPLAASRINDFYVDDFISGADSENEAK 882


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
 Frame = -2

Query: 549 ERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLFVRGIPRRTVQGPTRPRRQGL 370
           +R    + R Q    +HQ+     Q  R+Q Q+     L+   + RR      +   Q  
Sbjct: 271 QREQQQQQRVQQQNQQHQRQQQQQQQQRQQQQQQEQQELWTTVVRRRQNTQQQQQSNQPQ 330

Query: 369 DPQEDDGQTRRPR-RVHLRQE 310
             Q+  G+ + P+ R  L+Q+
Sbjct: 331 QQQQQTGRYQPPQMRQQLQQQ 351


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +1

Query: 454 LKLLSQVLMTSRMLLVTSLSSL 519
           LKLL+ V MTS+M+L+T L  L
Sbjct: 897 LKLLA-VCMTSQMMLITQLMPL 917


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,028
Number of Sequences: 2352
Number of extensions: 14515
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)