BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10k16r
(679 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y15629-1|CAA75724.1| 205|Drosophila melanogaster ferritin subun... 152 5e-37
U91524-1|AAB70121.1| 205|Drosophila melanogaster ferritin subun... 152 5e-37
AY061831-1|AAL27642.1| 205|Drosophila melanogaster LD25232p pro... 152 5e-37
AF145125-1|AAF07877.1| 180|Drosophila melanogaster ferritin 1 h... 152 5e-37
AE014297-4581|AAF57036.1| 205|Drosophila melanogaster CG2216-PD... 152 5e-37
AE014297-4580|AAF57037.1| 205|Drosophila melanogaster CG2216-PC... 152 5e-37
AE014297-4579|AAF57035.1| 205|Drosophila melanogaster CG2216-PB... 152 5e-37
AE014297-4578|AAF57034.1| 205|Drosophila melanogaster CG2216-PA... 152 5e-37
DQ373967-1|ABD19516.1| 186|Drosophila melanogaster ferritin 3 h... 63 3e-10
DQ373966-1|ABD19515.1| 186|Drosophila melanogaster ferritin 3 h... 63 3e-10
BT025000-1|ABE01230.1| 186|Drosophila melanogaster IP07551p pro... 63 3e-10
AE014298-1846|AAF48226.1| 186|Drosophila melanogaster CG4349-PA... 63 3e-10
BT001419-1|AAN71174.1| 121|Drosophila melanogaster GH12784p pro... 47 2e-05
AE014297-4582|AAN14227.1| 121|Drosophila melanogaster CG2216-PE... 47 2e-05
BT021310-1|AAX33458.1| 494|Drosophila melanogaster RE15812p pro... 32 0.83
AE014297-1771|AAF54999.1| 494|Drosophila melanogaster CG2988-PA... 32 0.83
AE014298-480|AAF45836.2| 826|Drosophila melanogaster CG32793-PA... 30 2.5
X66270-1|CAA46985.1| 497|Drosophila melanogaster ems W13 protein. 30 3.3
AE014298-1473|AAF46608.1| 2090|Drosophila melanogaster CG9817-PA... 30 3.3
X51653-1|CAA35965.1| 494|Drosophila melanogaster empty spiracle... 29 5.8
>Y15629-1|CAA75724.1| 205|Drosophila melanogaster ferritin subunit
1 protein.
Length = 205
Score = 152 bits (368), Expect = 5e-37
Identities = 74/125 (59%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Frame = -3
Query: 677 FDAATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVT 498
F AA EEREH +KL++YL MRG+LT V+DLI A W GA+AL AL LE VT
Sbjct: 81 FKAAKEEREHGSKLVEYLSMRGQLTEGVSDLINVPTVAKQEWTDGAAALSDALDLEIKVT 140
Query: 497 NSIREVIKTCESS-FNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFI 321
SIR++I+TCE+ +N YHLVDYL+G +L+EQ GQR+LAGK +TLKKMMD + LGEF+
Sbjct: 141 KSIRKLIQTCENKPYNHYHLVDYLTGVYLEEQLHGQRELAGKLTTLKKMMDTNGELGEFL 200
Query: 320 FDKKL 306
FDK L
Sbjct: 201 FDKTL 205
>U91524-1|AAB70121.1| 205|Drosophila melanogaster ferritin subunit
1 protein.
Length = 205
Score = 152 bits (368), Expect = 5e-37
Identities = 74/125 (59%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Frame = -3
Query: 677 FDAATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVT 498
F AA EEREH +KL++YL MRG+LT V+DLI A W GA+AL AL LE VT
Sbjct: 81 FKAAKEEREHGSKLVEYLSMRGQLTEGVSDLINVPTVAKQEWTDGAAALSDALDLEIKVT 140
Query: 497 NSIREVIKTCESS-FNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFI 321
SIR++I+TCE+ +N YHLVDYL+G +L+EQ GQR+LAGK +TLKKMMD + LGEF+
Sbjct: 141 KSIRKLIQTCENKPYNHYHLVDYLTGVYLEEQLHGQRELAGKLTTLKKMMDTNGELGEFL 200
Query: 320 FDKKL 306
FDK L
Sbjct: 201 FDKTL 205
>AY061831-1|AAL27642.1| 205|Drosophila melanogaster LD25232p
protein.
Length = 205
Score = 152 bits (368), Expect = 5e-37
Identities = 74/125 (59%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Frame = -3
Query: 677 FDAATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVT 498
F AA EEREH +KL++YL MRG+LT V+DLI A W GA+AL AL LE VT
Sbjct: 81 FKAAKEEREHGSKLVEYLSMRGQLTEGVSDLINVPTVAKQEWTDGAAALSDALDLEIKVT 140
Query: 497 NSIREVIKTCESS-FNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFI 321
SIR++I+TCE+ +N YHLVDYL+G +L+EQ GQR+LAGK +TLKKMMD + LGEF+
Sbjct: 141 KSIRKLIQTCENKPYNHYHLVDYLTGVYLEEQLHGQRELAGKLTTLKKMMDTNGELGEFL 200
Query: 320 FDKKL 306
FDK L
Sbjct: 201 FDKTL 205
>AF145125-1|AAF07877.1| 180|Drosophila melanogaster ferritin 1
heavy chain homolog protein.
Length = 180
Score = 152 bits (368), Expect = 5e-37
Identities = 74/125 (59%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Frame = -3
Query: 677 FDAATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVT 498
F AA EEREH +KL++YL MRG+LT V+DLI A W GA+AL AL LE VT
Sbjct: 56 FKAAKEEREHGSKLVEYLSMRGQLTEGVSDLINVPTVAKQEWTDGAAALSDALDLEIKVT 115
Query: 497 NSIREVIKTCESS-FNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFI 321
SIR++I+TCE+ +N YHLVDYL+G +L+EQ GQR+LAGK +TLKKMMD + LGEF+
Sbjct: 116 KSIRKLIQTCENKPYNHYHLVDYLTGVYLEEQLHGQRELAGKLTTLKKMMDTNGELGEFL 175
Query: 320 FDKKL 306
FDK L
Sbjct: 176 FDKTL 180
>AE014297-4581|AAF57036.1| 205|Drosophila melanogaster CG2216-PD,
isoform D protein.
Length = 205
Score = 152 bits (368), Expect = 5e-37
Identities = 74/125 (59%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Frame = -3
Query: 677 FDAATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVT 498
F AA EEREH +KL++YL MRG+LT V+DLI A W GA+AL AL LE VT
Sbjct: 81 FKAAKEEREHGSKLVEYLSMRGQLTEGVSDLINVPTVAKQEWTDGAAALSDALDLEIKVT 140
Query: 497 NSIREVIKTCESS-FNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFI 321
SIR++I+TCE+ +N YHLVDYL+G +L+EQ GQR+LAGK +TLKKMMD + LGEF+
Sbjct: 141 KSIRKLIQTCENKPYNHYHLVDYLTGVYLEEQLHGQRELAGKLTTLKKMMDTNGELGEFL 200
Query: 320 FDKKL 306
FDK L
Sbjct: 201 FDKTL 205
>AE014297-4580|AAF57037.1| 205|Drosophila melanogaster CG2216-PC,
isoform C protein.
Length = 205
Score = 152 bits (368), Expect = 5e-37
Identities = 74/125 (59%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Frame = -3
Query: 677 FDAATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVT 498
F AA EEREH +KL++YL MRG+LT V+DLI A W GA+AL AL LE VT
Sbjct: 81 FKAAKEEREHGSKLVEYLSMRGQLTEGVSDLINVPTVAKQEWTDGAAALSDALDLEIKVT 140
Query: 497 NSIREVIKTCESS-FNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFI 321
SIR++I+TCE+ +N YHLVDYL+G +L+EQ GQR+LAGK +TLKKMMD + LGEF+
Sbjct: 141 KSIRKLIQTCENKPYNHYHLVDYLTGVYLEEQLHGQRELAGKLTTLKKMMDTNGELGEFL 200
Query: 320 FDKKL 306
FDK L
Sbjct: 201 FDKTL 205
>AE014297-4579|AAF57035.1| 205|Drosophila melanogaster CG2216-PB,
isoform B protein.
Length = 205
Score = 152 bits (368), Expect = 5e-37
Identities = 74/125 (59%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Frame = -3
Query: 677 FDAATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVT 498
F AA EEREH +KL++YL MRG+LT V+DLI A W GA+AL AL LE VT
Sbjct: 81 FKAAKEEREHGSKLVEYLSMRGQLTEGVSDLINVPTVAKQEWTDGAAALSDALDLEIKVT 140
Query: 497 NSIREVIKTCESS-FNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFI 321
SIR++I+TCE+ +N YHLVDYL+G +L+EQ GQR+LAGK +TLKKMMD + LGEF+
Sbjct: 141 KSIRKLIQTCENKPYNHYHLVDYLTGVYLEEQLHGQRELAGKLTTLKKMMDTNGELGEFL 200
Query: 320 FDKKL 306
FDK L
Sbjct: 201 FDKTL 205
>AE014297-4578|AAF57034.1| 205|Drosophila melanogaster CG2216-PA,
isoform A protein.
Length = 205
Score = 152 bits (368), Expect = 5e-37
Identities = 74/125 (59%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Frame = -3
Query: 677 FDAATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVT 498
F AA EEREH +KL++YL MRG+LT V+DLI A W GA+AL AL LE VT
Sbjct: 81 FKAAKEEREHGSKLVEYLSMRGQLTEGVSDLINVPTVAKQEWTDGAAALSDALDLEIKVT 140
Query: 497 NSIREVIKTCESS-FNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFI 321
SIR++I+TCE+ +N YHLVDYL+G +L+EQ GQR+LAGK +TLKKMMD + LGEF+
Sbjct: 141 KSIRKLIQTCENKPYNHYHLVDYLTGVYLEEQLHGQRELAGKLTTLKKMMDTNGELGEFL 200
Query: 320 FDKKL 306
FDK L
Sbjct: 201 FDKTL 205
>DQ373967-1|ABD19516.1| 186|Drosophila melanogaster ferritin 3
heavy chain-like proteinsubunit protein.
Length = 186
Score = 63.3 bits (147), Expect = 3e-10
Identities = 41/120 (34%), Positives = 64/120 (53%)
Frame = -3
Query: 671 AATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNS 492
A+ EEREHA K++ Y+ RG L + + P + S AL+HA+K+E +V
Sbjct: 66 ASVEEREHAEKIMTYMNKRGGLI--ILSSVPQPLPC---FASTLDALKHAMKMELEVNKH 120
Query: 491 IREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDK 312
+ + + D +L D++ FL EQ GQ+ LA S L+K ++ +GEF+FDK
Sbjct: 121 LLD-LHALAGKEADPNLCDFIEANFLQEQVDGQKILADYISQLEKAQNQ---VGEFLFDK 176
>DQ373966-1|ABD19515.1| 186|Drosophila melanogaster ferritin 3
heavy chain-like proteinsubunit protein.
Length = 186
Score = 63.3 bits (147), Expect = 3e-10
Identities = 41/120 (34%), Positives = 64/120 (53%)
Frame = -3
Query: 671 AATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNS 492
A+ EEREHA K++ Y+ RG L + + P + S AL+HA+K+E +V
Sbjct: 66 ASVEEREHAEKIMTYMNKRGGLI--ILSSVPQPLPC---FASTLDALKHAMKMELEVNKH 120
Query: 491 IREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDK 312
+ + + D +L D++ FL EQ GQ+ LA S L+K ++ +GEF+FDK
Sbjct: 121 LLD-LHALAGKEADPNLCDFIEANFLQEQVDGQKILADYISQLEKAQNQ---VGEFLFDK 176
>BT025000-1|ABE01230.1| 186|Drosophila melanogaster IP07551p
protein.
Length = 186
Score = 63.3 bits (147), Expect = 3e-10
Identities = 41/120 (34%), Positives = 64/120 (53%)
Frame = -3
Query: 671 AATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNS 492
A+ EEREHA K++ Y+ RG L + + P + S AL+HA+K+E +V
Sbjct: 66 ASVEEREHAEKIMTYMNKRGGLI--ILSSVPQPLPC---FASTLDALKHAMKMELEVNKH 120
Query: 491 IREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDK 312
+ + + D +L D++ FL EQ GQ+ LA S L+K ++ +GEF+FDK
Sbjct: 121 LLD-LHALAGKEADPNLCDFIEANFLQEQVDGQKILADYISQLEKAQNQ---VGEFLFDK 176
>AE014298-1846|AAF48226.1| 186|Drosophila melanogaster CG4349-PA
protein.
Length = 186
Score = 63.3 bits (147), Expect = 3e-10
Identities = 41/120 (34%), Positives = 64/120 (53%)
Frame = -3
Query: 671 AATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNS 492
A+ EEREHA K++ Y+ RG L + + P + S AL+HA+K+E +V
Sbjct: 66 ASVEEREHAEKIMTYMNKRGGLI--ILSSVPQPLPC---FASTLDALKHAMKMELEVNKH 120
Query: 491 IREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDK 312
+ + + D +L D++ FL EQ GQ+ LA S L+K ++ +GEF+FDK
Sbjct: 121 LLD-LHALAGKEADPNLCDFIEANFLQEQVDGQKILADYISQLEKAQNQ---VGEFLFDK 176
>BT001419-1|AAN71174.1| 121|Drosophila melanogaster GH12784p
protein.
Length = 121
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = -3
Query: 677 FDAATEEREHATKLIDYLLMRGKLTGSVTDLI 582
F AA EEREH +KL++YL MRG+LT V+DLI
Sbjct: 81 FKAAKEEREHGSKLVEYLSMRGQLTEGVSDLI 112
>AE014297-4582|AAN14227.1| 121|Drosophila melanogaster CG2216-PE,
isoform E protein.
Length = 121
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = -3
Query: 677 FDAATEEREHATKLIDYLLMRGKLTGSVTDLI 582
F AA EEREH +KL++YL MRG+LT V+DLI
Sbjct: 81 FKAAKEEREHGSKLVEYLSMRGQLTEGVSDLI 112
>BT021310-1|AAX33458.1| 494|Drosophila melanogaster RE15812p
protein.
Length = 494
Score = 31.9 bits (69), Expect = 0.83
Identities = 37/132 (28%), Positives = 52/132 (39%), Gaps = 6/132 (4%)
Frame = -2
Query: 627 PAHEGKADRLRNRPHHVQGPRKHVVGERRISPRARPQAGE*--RHQQHPG---GHQDLRE 463
PAH + H+Q P H +SP + + QQHPG HQD++E
Sbjct: 87 PAHGLPYPHPHAQQQHLQAPHPHP----HLSPAQQHVLHQHLLMQQQHPGTPKSHQDIQE 142
Query: 462 QLQRLPPGRLFVRGI-PRRTVQGPTRPRRQGLDPQEDDGQTRRPRRVHLRQETPRIERIN 286
LQRL G+ P +T P + Q + + R P + Q +RI
Sbjct: 143 LLQRLHHNAAMASGLSPLQTRLSPETEQPQMAVSLK---RERSPAPPAMEQAENPAQRIQ 199
Query: 285 ILHVTPPLRSNP 250
H TPP +P
Sbjct: 200 PPH-TPPKSVSP 210
>AE014297-1771|AAF54999.1| 494|Drosophila melanogaster CG2988-PA
protein.
Length = 494
Score = 31.9 bits (69), Expect = 0.83
Identities = 37/132 (28%), Positives = 52/132 (39%), Gaps = 6/132 (4%)
Frame = -2
Query: 627 PAHEGKADRLRNRPHHVQGPRKHVVGERRISPRARPQAGE*--RHQQHPG---GHQDLRE 463
PAH + H+Q P H +SP + + QQHPG HQD++E
Sbjct: 87 PAHGLPYPHPHAQQQHLQAPHPHP----HLSPAQQHVLHQHLLMQQQHPGTPKSHQDIQE 142
Query: 462 QLQRLPPGRLFVRGI-PRRTVQGPTRPRRQGLDPQEDDGQTRRPRRVHLRQETPRIERIN 286
LQRL G+ P +T P + Q + + R P + Q +RI
Sbjct: 143 LLQRLHHNAAMASGLSPLQTRLSPETEQPQMAVSLK---RERSPAPPAMEQAENPAQRIQ 199
Query: 285 ILHVTPPLRSNP 250
H TPP +P
Sbjct: 200 PPH-TPPKSVSP 210
>AE014298-480|AAF45836.2| 826|Drosophila melanogaster CG32793-PA
protein.
Length = 826
Score = 30.3 bits (65), Expect = 2.5
Identities = 20/102 (19%), Positives = 46/102 (45%)
Frame = -2
Query: 600 LRNRPHHVQGPRKHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLFVRG 421
LR ++ P + V + + +P+ E + ++ P L E + P +
Sbjct: 716 LRKTGRSLEIPEEQVAPKGDLQKEEKPKEEE-QKEKLPKEEVQLEEIKKEEPQKEELQKE 774
Query: 420 IPRRTVQGPTRPRRQGLDPQEDDGQTRRPRRVHLRQETPRIE 295
P++ PR++ +PQ+++ Q P++ ++E P++E
Sbjct: 775 EPQKEEPQKEEPRKE--EPQKEEPQKEEPQKEEPQKEEPKVE 814
>X66270-1|CAA46985.1| 497|Drosophila melanogaster ems W13 protein.
Length = 497
Score = 29.9 bits (64), Expect = 3.3
Identities = 38/136 (27%), Positives = 55/136 (40%), Gaps = 6/136 (4%)
Frame = -2
Query: 639 AH*LPAHEGKADRLRNRPHHVQGPRKHVVGERRISPRARPQAGE*--RHQQHPG---GHQ 475
AH LP A + + + H+Q P H +SP + + QHPG HQ
Sbjct: 88 AHGLPYPHPHAQQQQQQ--HLQAPHPHP----HLSPAQQHVLHQHLLMQHQHPGTPKSHQ 141
Query: 474 DLREQLQRLPPGRLFVRGI-PRRTVQGPTRPRRQGLDPQEDDGQTRRPRRVHLRQETPRI 298
D++E LQRL G+ P +T P + Q + + R P + Q
Sbjct: 142 DIQELLQRLHHNAAMASGLSPLQTRLSPETEQPQMAVSLK---RERSPAPPAMEQAENPA 198
Query: 297 ERINILHVTPPLRSNP 250
+RI H TPP +P
Sbjct: 199 QRIQPPH-TPPKSVSP 213
>AE014298-1473|AAF46608.1| 2090|Drosophila melanogaster CG9817-PA
protein.
Length = 2090
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = -2
Query: 501 HQQHPGGHQDLREQLQRLPPGRLFVRGIPRRTVQGPTRPRRQGL----DPQEDDGQTRRP 334
HQQH H D ++Q + P +L +P + Q + ++Q DP +++ + R
Sbjct: 997 HQQHQQLHHDPQQQHPQYHPHQLHAHALPHQQQQQQQQQQQQQQQLHGDPDDEEVENARL 1056
Query: 333 RRVHLRQ 313
+V +Q
Sbjct: 1057 EQVRRKQ 1063
>X51653-1|CAA35965.1| 494|Drosophila melanogaster empty spiracles
homeotic protein protein.
Length = 494
Score = 29.1 bits (62), Expect = 5.8
Identities = 37/132 (28%), Positives = 52/132 (39%), Gaps = 6/132 (4%)
Frame = -2
Query: 627 PAHEGKADRLRNRPHHVQGPRKHVVGERRISPRARPQAGE*--RHQQHPG---GHQDLRE 463
PAH + H+Q P H +SP + + QQHPG HQD++E
Sbjct: 87 PAHGLPYPHPHAQQQHLQAPHPHP----HLSPAQQHVLHQHLLMQQQHPGTPKSHQDIQE 142
Query: 462 QLQRL-PPGRLFVRGIPRRTVQGPTRPRRQGLDPQEDDGQTRRPRRVHLRQETPRIERIN 286
LQRL + R P +T P + Q + + R P + Q +RI
Sbjct: 143 LLQRLHHNAAMATRLSPLQTRLSPETEQPQMAVSLK---RERSPAPPAMEQAENPAQRIQ 199
Query: 285 ILHVTPPLRSNP 250
H TPP +P
Sbjct: 200 PPH-TPPKSVSP 210
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,284,666
Number of Sequences: 53049
Number of extensions: 606488
Number of successful extensions: 1904
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1888
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -