Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10k16r
(679 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ... 48 4e-06
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ... 47 1e-05
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ... 45 5e-05
At2g19410.1 68415.m02264 protein kinase family protein contains ... 30 1.2
At1g13050.1 68414.m01513 expressed protein 30 1.2
At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protei... 28 6.5
At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protei... 28 6.5
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 28 6.5
At5g40450.1 68418.m04905 expressed protein 27 8.6
>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 48.4 bits (110), Expect = 4e-06
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Frame = -3
Query: 674 DAATEEREHATKLIDYLLMRG---KLTGSVTDLITYRAPANTSWESGASALEHALKLESD 504
+++ EEREHA KL++Y RG KL V L + + +E AL LE
Sbjct: 138 ESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFE---HVDKGDALYGMELALSLEKL 194
Query: 503 VTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEF 324
V + + + S ND HL D++ EFL EQ + + ++ + L+++ H G +
Sbjct: 195 VNEKLLN-LHSVASKNNDVHLADFIESEFLTEQVEAIKLISEYVAQLRRVGKGH---GTW 250
Query: 323 IFDKKLL 303
F++ LL
Sbjct: 251 HFNQMLL 257
>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 47.2 bits (107), Expect = 1e-05
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Frame = -3
Query: 674 DAATEEREHATKLIDYLLMRG---KLTGSVTDLITYRAPANTSWESGASALEHALKLESD 504
+++ EEREHA L++Y RG KL V + P A+E AL LE
Sbjct: 136 ESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQSEFDHPEK---GDALYAMELALSLEKL 192
Query: 503 VTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEF 324
V + + + S +D L D++ FL+EQ + + ++ S L+++ H G +
Sbjct: 193 VNEKLLN-LHSVASKNDDVQLADFIESVFLNEQVEAIKKISEYVSQLRRLGKGH---GTW 248
Query: 323 IFDKKLLG 300
FD++LLG
Sbjct: 249 HFDQELLG 256
>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
subunit cowpea2 precursor GI:2970654 (Vigna
unguiculata); contains Pfam profile PF00210:
Ferritin-like domain
Length = 253
Score = 44.8 bits (101), Expect = 5e-05
Identities = 35/124 (28%), Positives = 59/124 (47%)
Frame = -3
Query: 674 DAATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTN 495
D++ EER HA ++Y RG + L+ + A+E AL LE +TN
Sbjct: 130 DSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVSEFDHEEKGDALHAMELALSLEK-LTN 188
Query: 494 SIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFD 315
+++ ND LVD++ EFL EQ + + ++ + L+++ H G + FD
Sbjct: 189 EKLLKLQSVGVKNNDVQLVDFVESEFLGEQVEAIKKISEYVAQLRRIGKGH---GVWHFD 245
Query: 314 KKLL 303
+ LL
Sbjct: 246 QMLL 249
>At2g19410.1 68415.m02264 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 801
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = -3
Query: 575 RAPANTSWESGASALEHAL-KLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDE 408
R+P TS +S +E + +L++++ +++ + + CE F+ + V LS E+L+E
Sbjct: 297 RSPPETSRKSKKVEIEEEVERLKNELQSTVFKYKQACEELFSTQNKVKMLSTEYLNE 353
>At1g13050.1 68414.m01513 expressed protein
Length = 317
Score = 30.3 bits (65), Expect = 1.2
Identities = 30/106 (28%), Positives = 40/106 (37%)
Frame = -2
Query: 621 HEGKADRLRNRPHHVQGPRKHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPP 442
H+G N PHH Q P+ H V R+ + R RHQ P + + E P
Sbjct: 21 HQGGPSSSWNSPHHHQIPQAHSVAPPRVKIKTRG-----RHQTEP--PETIHESPSSRPL 73
Query: 441 GRLFVRGIPRRTVQGPTRPRRQGLDPQEDDGQTRRPRRVHLRQETP 304
+P R P R L P+E R P R + + TP
Sbjct: 74 PLRPEEPLPPR--HNPNSARPLQLSPEEQ----RPPHRGYGSEPTP 113
>At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protein
similar to Nit protein 2 [Homo sapiens] GI:9367116;
contains Pfam profile PF00795: hydrolase,
carbon-nitrogen family
Length = 294
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 548 SGASALEHALKLESDVTNSIREVIKTCESSFN 453
S S H LKL S T+++R + + SSFN
Sbjct: 37 SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68
>At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protein
similar to Nit protein 2 [Homo sapiens] GI:9367116;
contains Pfam profile PF00795: hydrolase,
carbon-nitrogen family
Length = 369
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 548 SGASALEHALKLESDVTNSIREVIKTCESSFN 453
S S H LKL S T+++R + + SSFN
Sbjct: 37 SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = -2
Query: 420 IPRRTVQGPTRPRRQGLDPQEDDGQTRRPRRVHLRQETPRIERINILHVTPPLRSNP 250
+P R V P P+ PQ +D + P + P+ +++H PP S P
Sbjct: 401 VPTRPVHKPQPPKES---PQPNDPYNQSPVKFRRSPPPPQQPHHHVVHSPPPASSPP 454
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 27.5 bits (58), Expect = 8.6
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Frame = -3
Query: 674 DAATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTN 495
D TEE EH + L + G LT T L T RA N S S S ++ E +
Sbjct: 2195 DYPTEEAEHGDETYSTLPVVGILTQLQTTLETERA-INDSASSEVSMIKEPADQEEKKGD 2253
Query: 494 SIREVIKTCESSF-NDYHLVDYLSGEFLD--EQYKGQRDLAGKASTLKKM 354
+V+++ E F +D L G+ E+ K + LAGK+ ++++
Sbjct: 2254 ---DVVESNEKDFVSDILEAKRLHGDKSGEAEKIKEESGLAGKSLPIEEI 2300
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,514,493
Number of Sequences: 28952
Number of extensions: 278495
Number of successful extensions: 787
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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