Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10k16f
(617 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 7e-11
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 46 2e-05
SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021) 38 0.005
SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3) 35 0.061
SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40) 31 0.75
SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10) 31 0.75
SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 0.75
SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053) 30 1.3
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0) 28 5.3
SB_32938| Best HMM Match : DUF204 (HMM E-Value=0.6) 28 5.3
SB_57416| Best HMM Match : rve (HMM E-Value=0.0011) 28 7.0
SB_6162| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_53292| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_41870| Best HMM Match : DUF963 (HMM E-Value=0.22) 28 7.0
SB_17318| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 27 9.2
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 66.5 bits (155), Expect = 2e-11
Identities = 39/99 (39%), Positives = 52/99 (52%)
Frame = +1
Query: 316 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 495
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L RG
Sbjct: 135 VNKQINLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRG-- 192
Query: 496 TGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSI 612
G + L + P W G A++ AL LE V ++
Sbjct: 193 -GRIV-LQDIKRPERDDWGCGQDAIQAALDLEKHVNQAL 229
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/99 (38%), Positives = 52/99 (52%)
Frame = +1
Query: 316 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 495
+ KQI E+ AS Y++M +F D V PGF K F +A+ EEREHA KL + L RG
Sbjct: 150 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRG-- 207
Query: 496 TGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSI 612
G + L + P W G ++ AL LE V ++
Sbjct: 208 -GRIV-LQDIKRPERDDWGCGQDVIQAALDLEKHVNQAL 244
>SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 65.3 bits (152), Expect = 4e-11
Identities = 39/96 (40%), Positives = 51/96 (53%)
Frame = +1
Query: 316 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 495
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L RG
Sbjct: 18 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFIKASHEEREHAEKLAKFQLQRG-- 75
Query: 496 TGSVTDLITYRAPANTSWESGASALEHALKLESDVT 603
G + L + P W G A++ AL LE+ T
Sbjct: 76 -GRIV-LQDIKRPERDDWGCGQDAIQAALDLENTST 109
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 64.5 bits (150), Expect = 7e-11
Identities = 39/105 (37%), Positives = 54/105 (51%)
Frame = +1
Query: 298 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYL 477
+ C + KQI E+ AS YL+M +F D V PGF K F A+ EEREHA KL+ +
Sbjct: 197 EECEAGINKQINLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLMKFQ 256
Query: 478 LMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSI 612
RG G + L + P W G +++ AL LE V ++
Sbjct: 257 NERG---GRIV-LQDIKKPEKDEWGCGMDSIQVALDLEKHVNQAL 297
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/80 (35%), Positives = 41/80 (51%)
Frame = +1
Query: 373 AYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWE 552
A+F D ++ PGFA F AA EE HA +++L RG G V L P W
Sbjct: 2 AHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRG---GRV-KLHHIMKPCRDHWG 57
Query: 553 SGASALEHALKLESDVTNSI 612
+G A+ AL LE ++ +++
Sbjct: 58 NGLMAMRDALYLEKEINHAL 77
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = +1
Query: 298 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATK 462
+ C + KQI E+ AS Y +M YF + V+ PGF K F A EEREHA K
Sbjct: 10 EECEAGINKQINLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEEREHAEK 64
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +1
Query: 316 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHA 456
+ KQI +E+ A YL+M +F D +N PGF K F A+ EE EHA
Sbjct: 38 INKQINKELYAHYTYLSMAFHFDRDDINLPGFNKFFKKASKEEWEHA 84
>SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021)
Length = 73
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +1
Query: 430 AATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNS 609
A+ EEREHA KL + L RG G + L + P W G A++ AL LE V +
Sbjct: 3 ASHEEREHAEKLAKFQLQRG---GRIV-LQDIKRPERDDWGCGQDAIQAALDLEKHVNQA 58
Query: 610 I 612
+
Sbjct: 59 L 59
>SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 37.1 bits (82), Expect = 0.011
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 18/98 (18%)
Frame = +1
Query: 376 YFSIDTVNRPGFAKLFFDAATEEREHA---------TK-----LIDYLLMR--GKLT--G 501
+F D +N PGF K F A+ EE EHA TK I +LL + LT G
Sbjct: 32 HFDRDDINLPGFNKFFKKASKEEWEHAQMVKTAALQTKCYRKLTIVWLLFQFMAYLTKRG 91
Query: 502 SVTDLITYRAPANTSWESGASALEHALKLESDVTNSIR 615
L P W +G A+E AL LE ++ +S++
Sbjct: 92 GRVKLNDIPTPCRDQWGNGLMAMEDALALEKEILSSLQ 129
>SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3)
Length = 249
Score = 34.7 bits (76), Expect = 0.061
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +1
Query: 376 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 519
+F++ +N+PG ++ FDAA+E + T L YLL T S+T ++
Sbjct: 30 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKYLLHGPDCTNSLTGVL 75
>SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 31.1 bits (67), Expect = 0.75
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 376 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 519
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 350 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 395
>SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40)
Length = 1740
Score = 31.1 bits (67), Expect = 0.75
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 376 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 519
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 868 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 913
>SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10)
Length = 475
Score = 31.1 bits (67), Expect = 0.75
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 376 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 519
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 151 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 196
>SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1244
Score = 31.1 bits (67), Expect = 0.75
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 376 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 519
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 667 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 712
>SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1515
Score = 31.1 bits (67), Expect = 0.75
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 376 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 519
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 945 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 990
>SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)
Length = 1152
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 264 RHHQG*VAHHGADLLQHDEETDPGGSG 344
RHHQ AHHG L+HD E D GSG
Sbjct: 811 RHHQH-GAHHG---LKHDTENDASGSG 833
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/79 (26%), Positives = 35/79 (44%)
Frame = +2
Query: 377 TSRSIR*TAPASRSYSSMLRLKNASTRPSSLTTCS*GES*QAP*PTSSRTGPPQTRRGRA 556
T+ S+ TAP + + S A+T P + T + +A + + T P T A
Sbjct: 181 TTASLVTTAPEATTASLATTASLATTAPETTTASLATTAPEATTASLATTAPETTTASLA 240
Query: 557 AHQPSSTPSSWRVTSPTAS 613
P +T +S T+P A+
Sbjct: 241 TTAPEATTASLATTAPEAT 259
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/79 (26%), Positives = 35/79 (44%)
Frame = +2
Query: 377 TSRSIR*TAPASRSYSSMLRLKNASTRPSSLTTCS*GES*QAP*PTSSRTGPPQTRRGRA 556
T+ S+ TAP + + S A+T P + T + +A + + T P T A
Sbjct: 596 TTASLVTTAPEATTASLATTASLATTAPETATASLATTAPEATTASLATTAPKTTTASLA 655
Query: 557 AHQPSSTPSSWRVTSPTAS 613
P +T +S T+P A+
Sbjct: 656 TTAPEATTASLVTTAPEAT 674
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = +2
Query: 398 TAPASRSYSSMLRLKNASTRPSSLTTCS*GES*QAP*PTSSRTGPPQTRRGRAAHQPSST 577
T+P S SS + T S T+ S ++ +P +S T PPQT + S
Sbjct: 670 TSPQETSTSSSKQTSTQQTSSSQQTSTSPPQTTTSPSQQTS-TSPPQTTTSPSQQTTSPP 728
Query: 578 PSSWRVTSP 604
PSS + P
Sbjct: 729 PSSPSIGQP 737
>SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 312 VVASLLHGEPLIPDGDGADVTLCSCGRS*GSNESEDSKENSPH 184
V+A LL G+P+ P G D L + G+ E KE +PH
Sbjct: 252 VLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQIKEMNPH 293
>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 937
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 515 SSRTGPPQTRRGRAAHQPSSTPSS 586
++RTGPPQ+R+ H+ S+T S
Sbjct: 419 ANRTGPPQSRQAVPRHRTSATADS 442
>SB_32938| Best HMM Match : DUF204 (HMM E-Value=0.6)
Length = 433
Score = 28.3 bits (60), Expect = 5.3
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 11/97 (11%)
Frame = +1
Query: 352 IQYLAMG--AYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGK--LTGSVTDLI 519
I +LA G AYF +D RPG A + + +L+ Y L R + L G + D
Sbjct: 193 IVWLASGRVAYFFLDYSKRPGIAAIVIVGGCFVVQPLIQLMHYGLYRARIWLQGVLLDGT 252
Query: 520 TYRA---PANTSWESGASAL----EHALKLESDVTNS 609
+ R NT++ +G A E A K +T S
Sbjct: 253 SVRGGGEGVNTAYSNGRDAFRRTEERAFKTSLSLTRS 289
>SB_57416| Best HMM Match : rve (HMM E-Value=0.0011)
Length = 807
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 376 YFSIDTVNRPGFAKLFFDAATEEREHA 456
+F + + N+PG ++ FDAA + R ++
Sbjct: 138 HFGVTSANKPGCVRIVFDAAAKTRTNS 164
>SB_6162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1808
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 222 SNESEDSKENSPHLNFSYNHRFFDDT 145
+ ES KEN PH + N R +D+T
Sbjct: 413 AEESTSDKENVPHCSHGNNERCYDNT 438
>SB_53292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/99 (20%), Positives = 42/99 (42%)
Frame = +1
Query: 319 RKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLT 498
RK +EE+ Q + N+PG ++ FDAA E + L LL +T
Sbjct: 39 RKLTEEELRTESQTTWFLPTHPVQNPNKPGKLRIVFDAAAEFQ--GISLNKALLSGPDVT 96
Query: 499 GSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIR 615
++ ++ N + A+ H +++ + ++++
Sbjct: 97 NNLVAVLLQFCQGNIGIAADVEAMFHQIRVRKEDQDALQ 135
>SB_41870| Best HMM Match : DUF963 (HMM E-Value=0.22)
Length = 233
Score = 27.9 bits (59), Expect = 7.0
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = -1
Query: 617 SRMLLVTSLSSLRACSRADAPLSHDVFAGALYVM---RSV--TEPVSFPL---MSR*SMS 462
SR +L TS S L A SR+ S V A + Y++ RSV T SF + S S
Sbjct: 148 SRSVLATSRSVL-ATSRSVLATSRSVLATSRYILATSRSVLATGRSSFATSRYILATSRS 206
Query: 461 LVACSRSSVAASKNSFA 411
++A SRS +A ++SFA
Sbjct: 207 VLATSRSVLATGRSSFA 223
>SB_17318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 517 ITYRAPANTSWESGASALEHALKLESD 597
+TY + +W SG L H++K++ D
Sbjct: 164 VTYHCLNSAAWSSGKGDLNHSIKIKGD 190
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 315 DEETDPGGSGRVNPVLSHGGLLLDRYGEP 401
D DPGG R++ + HGG +DR G P
Sbjct: 226 DRPMDPGGP-RMDHPMGHGGPPMDRGGPP 253
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,397,669
Number of Sequences: 59808
Number of extensions: 349086
Number of successful extensions: 942
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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