Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k16f
         (617 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ...    52   2e-07
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ...    49   2e-06
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ...    48   5e-06
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin...    47   1e-05
At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85 hy...    40   0.001
At1g13050.1 68414.m01513 expressed protein                             29   2.5  
At2g18230.1 68415.m02124 inorganic pyrophosphatase [soluble] (PP...    29   3.3  
At1g79060.1 68414.m09218 expressed protein                             29   3.3  
At4g25520.1 68417.m03680 transcriptional co-regulator family pro...    28   4.3  
At3g09000.1 68416.m01053 proline-rich family protein                   28   4.3  

>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 52.4 bits (120), Expect = 2e-07
 Identities = 27/62 (43%), Positives = 35/62 (56%)
 Frame = +1

Query: 304 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLM 483
           C   + +QI  E   S  Y AM AYF  D +   G AK F +++ EEREHA KL++Y   
Sbjct: 97  CEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNK 156

Query: 484 RG 489
           RG
Sbjct: 157 RG 158


>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 26/62 (41%), Positives = 34/62 (54%)
 Frame = +1

Query: 304 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLM 483
           C   + +QI  E   S  Y A+ AYF  D V   G AK F +++ EEREHA  L++Y   
Sbjct: 95  CEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNK 154

Query: 484 RG 489
           RG
Sbjct: 155 RG 156


>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
           subunit cowpea2 precursor GI:2970654 (Vigna
           unguiculata); contains Pfam profile PF00210:
           Ferritin-like domain
          Length = 253

 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 34/94 (36%), Positives = 44/94 (46%)
 Frame = +1

Query: 325 QIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGS 504
           QI  E   S  Y A+ AYF  D V   GFAK F D++ EER HA   ++Y   RG     
Sbjct: 96  QINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKL 155

Query: 505 VTDLITYRAPANTSWESGASALEHALKLESDVTN 606
            + L+      +        A+E AL LE  +TN
Sbjct: 156 QSILMPVSEFDHEEKGDALHAMELALSLEK-LTN 188


>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
           [Arabidopsis thaliana] GI:1246401, GI:8163920
          Length = 255

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 24/59 (40%), Positives = 33/59 (55%)
 Frame = +1

Query: 313 MMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 489
           ++ +QI  E   S  Y +M AYF  D V   G AK F +++ EER HA K ++Y   RG
Sbjct: 97  VINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRG 155


>At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85
           hypothetical protein F9F8.14 - Arabidopsis thaliana,
           EMBL:AC009991
          Length = 355

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = +1

Query: 328 IQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDY 474
           I  E   S  Y A+ AY   D V   GF K F D++ EER +A K ++Y
Sbjct: 297 IDVEYNVSYVYHALDAYIERDNVGLKGFTKFFNDSSLEERGYAEKFMEY 345


>At1g13050.1 68414.m01513 expressed protein
          Length = 317

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +3

Query: 480 HEGKADRLRNRPHHVQGPRKHVVGERRISPRARPQAGE*RHQQHP 614
           H+G      N PHH Q P+ H V   R+  + R      RHQ  P
Sbjct: 21  HQGGPSSSWNSPHHHQIPQAHSVAPPRVKIKTRG-----RHQTEP 60


>At2g18230.1 68415.m02124 inorganic pyrophosphatase [soluble] (PPA)
           / pyrophosphate phospho-hydrolase / PPase nearly
           identical to SP|P21216 Soluble inorganic pyrophosphatase
           (EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase)
           {Arabidopsis thaliana}
          Length = 218

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = -3

Query: 285 PLIPDGDGADVTLCSCGRS*GSNESEDSKENSPHLNFSYNHRFFDDTQKN 136
           P+I  G+  D  +  C          D KE  PH   +   RFF+D +KN
Sbjct: 133 PMIDQGEKDDKIIAVCADDPEFRHYRDIKELPPH-RLAEIRRFFEDYKKN 181


>At1g79060.1 68414.m09218 expressed protein
          Length = 396

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -3

Query: 306 ASLLHGEPLIPDGDGADVTLCSCGRS*GSNESEDSKENSPHLN 178
           ASLL   PL+ D D   V++ S   S  S+ S    E+ P L+
Sbjct: 175 ASLLMSLPLLKDSDSESVSISSSRMSLSSSSSGHDHEDLPRLS 217


>At4g25520.1 68417.m03680 transcriptional co-regulator family
           protein contains similarity to GP|18033922|gb|AAL57277
           SEUSS transcriptional co-regulator [Arabidopsis
           thaliana]
          Length = 748

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +2

Query: 401 APASRSYSSMLRLKNASTRPSSLTTCS*GES*QAP*PTSSRT 526
           A A  +Y SML  +NA   P+S T    G S Q P P S+++
Sbjct: 558 AAALTNYQSMLMRQNAMNNPNSNTGKQEGFSSQNPTPNSNQS 599


>At3g09000.1 68416.m01053 proline-rich family protein
          Length = 541

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
 Frame = +2

Query: 329 SRRKWPRQSST*PWGLTSRSI-------R*TAPASRSYSSMLRLKNASTRPSSLTTCS*G 487
           SR   P + ST P   TSR +       R + P SR+  +  R   ++  P + TT S G
Sbjct: 157 SRPATPTRRSTTPTTSTSRPVTTRASNSRSSTPTSRATLTAARATTSTAAPRTTTTSS-G 215

Query: 488 ES*QAP*PTSSRTGPPQTRRGRAAHQPSSTPSSWRVTSPT 607
            +  A  PT S   P      +   +P +TP+  R ++PT
Sbjct: 216 SARSAT-PTRSNPRPSSASSKKPVSRP-ATPTR-RPSTPT 252


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,908,279
Number of Sequences: 28952
Number of extensions: 234762
Number of successful extensions: 653
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)