Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k14r
         (742 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.3  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.3  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   7.0  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 378 TTNIIS*LVRHYVIPYHEISDLF 446
           T NIIS  V    IP +EI +LF
Sbjct: 48  TYNIISAAVNRLNIPANEILELF 70


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 378 TTNIIS*LVRHYVIPYHEISDLF 446
           T NIIS  V    IP +EI +LF
Sbjct: 48  TYNIISAAVNRLNIPANEILELF 70


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 486 RNFAMSSFVHLTYFI*FLHDFSNIESR 566
           +NF  +SF+ + YFI FL+  S +  R
Sbjct: 9   KNFPSTSFILINYFI-FLYFNSLVRFR 34


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,510
Number of Sequences: 438
Number of extensions: 4142
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)