Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k14r
         (742 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g25390.2 68418.m03012 AP2 domain-containing transcription fac...    29   4.3  
At5g25390.1 68418.m03011 AP2 domain-containing transcription fac...    29   4.3  
At3g46730.1 68416.m05073 disease resistance protein (CC-NBS clas...    29   4.3  
At5g38970.2 68418.m04712 cytochrome P450, putative similar to Cy...    28   7.5  
At5g38970.1 68418.m04713 cytochrome P450, putative similar to Cy...    28   7.5  
At3g49070.1 68416.m05361 expressed protein similar to At14a (GI:...    27   9.9  

>At5g25390.2 68418.m03012 AP2 domain-containing transcription
           factor, putative AP2 domain containing protein RAP2.4
           [Arabidopsis thaliana] EMBL:AF003097
          Length = 189

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -1

Query: 619 NSHQLVNKTKLPKGLLVCLDSILLKSCKNQIKYVK*TKLD 500
           NS ++ +  + PK L   L++ L K+CK+Q  Y+   +LD
Sbjct: 71  NSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLD 110


>At5g25390.1 68418.m03011 AP2 domain-containing transcription
           factor, putative AP2 domain containing protein RAP2.4
           [Arabidopsis thaliana] EMBL:AF003097
          Length = 186

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -1

Query: 619 NSHQLVNKTKLPKGLLVCLDSILLKSCKNQIKYVK*TKLD 500
           NS ++ +  + PK L   L++ L K+CK+Q  Y+   +LD
Sbjct: 68  NSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLD 107


>At3g46730.1 68416.m05073 disease resistance protein (CC-NBS class),
           putative domain signature CC-NBS exists, suggestive of a
           disease resistance protein.
          Length = 847

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +2

Query: 74  WRYLKI-TLSFQNSFYIVFEEVRYTIEFCFIYY 169
           WR LK  ++     F + F+E+R+ ++ CF+Y+
Sbjct: 392 WRRLKDNSIHISTVFDLSFKEMRHELKLCFLYF 424


>At5g38970.2 68418.m04712 cytochrome P450, putative similar to
           Cytochrome P450 85 (SP:Q43147) {Lycopersicon
           esculentum};
          Length = 384

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +2

Query: 47  YKIPLITS*WRYLKITLSFQNSFYI 121
           Y+ PLI + WR++K +L  QNS ++
Sbjct: 302 YEDPLIFNPWRWMKKSLESQNSCFV 326


>At5g38970.1 68418.m04713 cytochrome P450, putative similar to
           Cytochrome P450 85 (SP:Q43147) {Lycopersicon
           esculentum};
          Length = 465

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +2

Query: 47  YKIPLITS*WRYLKITLSFQNSFYI 121
           Y+ PLI + WR++K +L  QNS ++
Sbjct: 383 YEDPLIFNPWRWMKKSLESQNSCFV 407


>At3g49070.1 68416.m05361 expressed protein similar to At14a
           (GI:11994571 and GI:11994573) [Arabidopsis thaliana]
          Length = 416

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 641 SPKIFKSKFPPIGKQNKITKGTSRM 567
           +P +  S+F P G +NK+TK  +R+
Sbjct: 281 APTLLASQFKPAGLRNKLTKTAARL 305


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,870,318
Number of Sequences: 28952
Number of extensions: 268182
Number of successful extensions: 449
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)