Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k14f
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.30 
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    24   1.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    24   1.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   1.6  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   6.4  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   6.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 19/74 (25%), Positives = 33/74 (44%)
 Frame = -1

Query: 480 LSRRYYFVCIYSFV*TNLIF*IRSINITQFRHNVH*SV*TLLAVFHFAYVLYHVTFKMFV 301
           L R YYF C+      +L+F + S   T   H +      +  V HF    Y+  +   +
Sbjct: 53  LRRIYYFYCVSITFNVHLLFLLCSGYFTV--HLLFYCPFIIFTV-HFLLCTYYFYYAFII 109

Query: 300 VVVSYIVYHSTLIF 259
           ++  Y  Y++ +IF
Sbjct: 110 LLCVYYFYYAFIIF 123


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 336 YVLYHVTFKMFVVVVSYIVYHSTL 265
           YVL+ V F  FVVV   +V +  L
Sbjct: 156 YVLFFVNFAFFVVVKMLLVRYRNL 179


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 336 YVLYHVTFKMFVVVVSYIVYHSTL 265
           YVL+ V F  FVVV   +V +  L
Sbjct: 156 YVLFFVNFAFFVVVKMLLVRYRNL 179


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 456 IQNNIDEIVAGCEQD 500
           IQ+N+D +V  CEQD
Sbjct: 317 IQHNLDVLVDMCEQD 331


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 324 DIRHKQNEKQRGVF 365
           D   K+N+K+RG+F
Sbjct: 172 DTNGKKNQKKRGIF 185


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 324 DIRHKQNEKQRGVF 365
           D   K+N+K+RG+F
Sbjct: 328 DTNGKKNQKKRGIF 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,103
Number of Sequences: 336
Number of extensions: 2866
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)