Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k11r
         (763 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7SNY5 Cluster: Predicted protein; n=1; Nematostella ve...    37   0.47 
UniRef50_Q6C1Q0 Cluster: Similar to wi|NCU09014.1 Neurospora cra...    36   1.1  
UniRef50_A5K9Q8 Cluster: Replication factor c, putative; n=1; Pl...    34   3.3  
UniRef50_UPI000065CAA2 Cluster: Homolog of Brachydanio rerio "No...    34   4.4  
UniRef50_Q1DIX6 Cluster: Putative uncharacterized protein; n=26;...    34   4.4  
UniRef50_A6REG7 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_Q86XN7 Cluster: Uncharacterized protein KIAA2032; n=29;...    33   7.7  

>UniRef50_A7SNY5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 281

 Score = 37.1 bits (82), Expect = 0.47
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -2

Query: 393 RAPCALMVKTVLPLYKMVLLISTLHNTVTYCKLFQCYFRKKVLFQIVKKII 241
           + PC L+V  +  L  + +  S +H+   YC +  CY  KK L + +K ++
Sbjct: 116 QGPCLLLVDDLSILLSLGVTASKVHDFAHYCMVLMCYSSKKTLHERIKALL 166


>UniRef50_Q6C1Q0 Cluster: Similar to wi|NCU09014.1 Neurospora crassa
           NCU09014. 1 hypothetical protein; n=1; Yarrowia
           lipolytica|Rep: Similar to wi|NCU09014.1 Neurospora
           crassa NCU09014. 1 hypothetical protein - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 262

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 26/57 (45%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = +2

Query: 113 IDC*KQFFRNVGINFIE*FMYSKL--HINKPKNCKVYFKKIGPNVIIFFTI*NKTFL 277
           +DC  Q++R    NF E FMY  L  HI++PK CK  F    P  I FF   N TFL
Sbjct: 138 LDCLAQWWRP---NF-EVFMYPFLPPHISRPKECKKTFLISLPEKIAFFVPSNMTFL 190


>UniRef50_A5K9Q8 Cluster: Replication factor c, putative; n=1;
           Plasmodium vivax|Rep: Replication factor c, putative -
           Plasmodium vivax
          Length = 1095

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 453 ILKTFLSSTVHFFHKSVIRRYYYLQGIYYAYN 548
           I+K  L     FFH+++   Y YLQ  YY Y+
Sbjct: 590 IIKRLLEECHQFFHRNLANEYNYLQSYYYVYD 621


>UniRef50_UPI000065CAA2 Cluster: Homolog of Brachydanio rerio "Novel
           lectin C-type domain containing protein.; n=1; Takifugu
           rubripes|Rep: Homolog of Brachydanio rerio "Novel lectin
           C-type domain containing protein. - Takifugu rubripes
          Length = 355

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
 Frame = +1

Query: 223 KNWTKCNNFFYNLKQNFFAKITLKQLTIGNRIMEGRDKEHHL---V*GQYCLYHKGT--- 384
           K WT+  N+    K+NF++  TLK  T  N  +  +D    +     G+   + KG+   
Sbjct: 148 KTWTEALNY---CKENFYSLATLKDYTSRNSAVVQKDFPVWIGLYREGKMWKWSKGSSEY 204

Query: 385 RGPCPGLPFSGGSERPTISLTRLFSKHFCRAQYTFFTNQ*SEGIIIYKE 531
           R    G P + G      S+TR  S   CRA++ F   +  E +I+ KE
Sbjct: 205 RNWATGEPKNDGDCVTISSITRKMSTQDCRARFPFVCLK--ENLILVKE 251


>UniRef50_Q1DIX6 Cluster: Putative uncharacterized protein; n=26;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 1124

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 22/61 (36%), Positives = 32/61 (52%)
 Frame = -2

Query: 339 LLISTLHNTVTYCKLFQCYFRKKVLFQIVKKIITFGPIFLKYTLQFLGLFMCNFEYMNYS 160
           L++ TL N   YCKL +C F    +  + KK I    IFL++T  F   F+  F  + YS
Sbjct: 771 LILKTLKNADFYCKLAKCKFNTHKIDYLGKKEI---QIFLEFT-NFYRHFIPRFSKIAYS 826

Query: 159 M 157
           +
Sbjct: 827 L 827


>UniRef50_A6REG7 Cluster: Putative uncharacterized protein; n=1;
           Ajellomyces capsulatus NAm1|Rep: Putative
           uncharacterized protein - Ajellomyces capsulatus NAm1
          Length = 989

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = -2

Query: 381 ALMVKTVLPLYKMVLLISTLHNTVTYCKLFQCYFRKKVLFQIVKKIITFGPIFLKYTLQF 202
           +L  K  LP    V+  S L  ++T+    + Y     L ++V   +TF P F+  T+ +
Sbjct: 666 SLQAKEGLPFGNQVVAWSVLVASLTFPFFHRLYPNSHYLHRLVVIFLTFSPTFIILTISY 725

Query: 201 LGLF 190
            GLF
Sbjct: 726 EGLF 729


>UniRef50_Q86XN7 Cluster: Uncharacterized protein KIAA2032; n=29;
            Tetrapoda|Rep: Uncharacterized protein KIAA2032 - Homo
            sapiens (Human)
          Length = 944

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +3

Query: 339  APSCIGAILSLP*GHTGPVPRAPILRGLRK--TDNFSHTFILKTFLSSTVHFFHKSVIRR 512
            APS + A+  LP   T P P AP+L G     + NF+   + +  LSS +     SV   
Sbjct: 811  APSTVAAVTPLPVAATAPSP-APVLPGFASAFSSNFNSALVAQAGLSSGLQAAGSSVFPG 869

Query: 513  YYYLQGI 533
               L GI
Sbjct: 870  LLSLPGI 876


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,146,340
Number of Sequences: 1657284
Number of extensions: 14463284
Number of successful extensions: 34018
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34011
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)