Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k11r
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   1.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   2.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.1  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -3

Query: 428 LSEPPE-NGSPGHGPRVPLW*RQYCPYTRWCSLSLPSIIRLPIVSCFNV 285
           LS PP     P H  +   +      Y+ W ++  P+ +  P ++C+++
Sbjct: 278 LSPPPHVYNPPDHIQQATPYSAPGPTYSTWSTVQTPTTVMSPTINCWSL 326


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -2

Query: 342 VLLISTLHNTVTYCKLFQCYFR-KKVLFQIVKKIITFGPIFLKYTLQFLGLFMCN 181
           VLLI  LH ++ Y   F  +++  K++  + K  +T+  +F  + L      +CN
Sbjct: 167 VLLIGDLHTSI-YIIFFDMFYQHHKIVLDMGKNCVTY--VFDLFYLSKRASDLCN 218


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -1

Query: 247 NYYIWSNFFKIYFTIFRFVY 188
           NY   +++ +++FT+F  V+
Sbjct: 518 NYQSLAHYLRVFFTVFNVVH 537


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 465  FLSSTVHFFHKSVIRRYYY 521
            FLSST   F K ++ +Y Y
Sbjct: 1227 FLSSTEILFWKDLLDKYLY 1245


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 465  FLSSTVHFFHKSVIRRYYY 521
            FLSST   F K ++ +Y Y
Sbjct: 1227 FLSSTEILFWKDLLDKYLY 1245


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 465  FLSSTVHFFHKSVIRRYYY 521
            FLSST   F K ++ +Y Y
Sbjct: 1227 FLSSTEILFWKDLLDKYLY 1245


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 465  FLSSTVHFFHKSVIRRYYY 521
            FLSST   F K ++ +Y Y
Sbjct: 1227 FLSSTEILFWKDLLDKYLY 1245


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 606 FLVTISITVSFGFLLSKIFYYRHSIFLVN 520
           FLV + + +     LS IFYY+ +  LV+
Sbjct: 199 FLVLVFVQMQSVQDLSDIFYYKDTAQLVS 227


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 597 TISITVSFGFLLSKIFYYRHSIFLVNNNT 511
           TI+   SFGF+L +      S   +NN +
Sbjct: 388 TINFMFSFGFILLRFLSVFESCTRLNNES 416


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,329
Number of Sequences: 336
Number of extensions: 4249
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)