Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k11r
         (763 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    26   1.5  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   5.9  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    24   5.9  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   7.8  

>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +2

Query: 308 VTVLWRVEIRSTILYRGNTVFTIRAHGARAQGSHSQGAP 424
           V+ LWR  +R  I +      T R HG   QGS   GAP
Sbjct: 298 VSKLWR-GLRHEIKHSSLYQQTSRQHGTGGQGSSVGGAP 335


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 393 RAPCALMVKTVLPLYKMVLLISTLHNTVTYCKLFQCY 283
           R   AL + T+LP + ++  IS+  +     ++  CY
Sbjct: 39  RTILALRLVTLLPCFNVLTFISSFFSLFQTARVLTCY 75


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 491 KKVYCARQKCFENKRVREIVGLSEPPEN 408
           K+ Y    KCFEN  VR ++   E P++
Sbjct: 251 KRAYHLLYKCFEN--VRNVISAYELPDS 276


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
 Frame = -3

Query: 479 CARQKCFENKRVREIVGLSEPPENGSPGHG--PRVPLW*RQYCPYTRW 342
           C R+ C    + R I  L  PP +        PR+  W  +  P  RW
Sbjct: 206 CCRKTCGTGWKYRSISSLHAPPSHPGAHRAAEPRLD-WRIKILPLPRW 252


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,831
Number of Sequences: 2352
Number of extensions: 16076
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)