Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k11r
         (763 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    23   3.1  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          23   3.1  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          23   3.1  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          23   3.1  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          23   3.1  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          23   3.1  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   3.1  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          23   3.1  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   3.1  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   4.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   7.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   7.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   9.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.4  

>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 286 LFSQKSFVSNCKKNYYIWSNFFKIYFTI 203
           + S  S   N   NYY  +N+ K+Y+ I
Sbjct: 303 IISSLSNSCNYSNNYYNNNNYKKLYYNI 330


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 399 RAPILRGLRKTDNFSHTFILKTFLSST 479
           R+P  RG     N S TFIL   L S+
Sbjct: 80  RSPESRGRSNASNTSKTFILSEKLESS 106


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 399 RAPILRGLRKTDNFSHTFILKTFLSST 479
           R+P  RG     N S TFIL   L S+
Sbjct: 80  RSPESRGRSNASNTSKTFILSEKLESS 106


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 399 RAPILRGLRKTDNFSHTFILKTFLSST 479
           R+P  RG     N S TFIL   L S+
Sbjct: 80  RSPESRGRSNASNTSKTFILSEKLESS 106


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 399 RAPILRGLRKTDNFSHTFILKTFLSST 479
           R+P  RG     N S TFIL   L S+
Sbjct: 80  RSPESRGRSNASNTSKTFILSEKLESS 106


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 399 RAPILRGLRKTDNFSHTFILKTFLSST 479
           R+P  RG     N S TFIL   L S+
Sbjct: 80  RSPESRGRSNASNTSKTFILSEKLESS 106


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 399 RAPILRGLRKTDNFSHTFILKTFLSST 479
           R+P  RG     N S TFIL   L S+
Sbjct: 80  RSPESRGRSNASNTSKTFILSEKLESS 106


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 399 RAPILRGLRKTDNFSHTFILKTFLSST 479
           R+P  RG     N S TFIL   L S+
Sbjct: 80  RSPESRGRSNASNTSKTFILSEKLESS 106


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 399 RAPILRGLRKTDNFSHTFILKTFLSST 479
           R+P  RG     N S TFIL   L S+
Sbjct: 80  RSPESRGRSNASNTSKTFILSEKLESS 106


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 176 SKLHINKPKNCKVYFKKIGPNVIIFFTI 259
           SKL +NK  N K+Y   +  N+ +  T+
Sbjct: 519 SKL-VNKRNNAKIYTSSVNSNLTVNQTV 545


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 486 FFHKSVIRRYY 518
           F HK V+ RYY
Sbjct: 260 FLHKQVLNRYY 270


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 486 FFHKSVIRRYY 518
           F HK V+ RYY
Sbjct: 260 FLHKQVLNRYY 270


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +2

Query: 386 GARAQGSHSQGAPKDRQFLSHVYSQNIFVEH 478
           G RA        P+D   + H YS    +EH
Sbjct: 114 GMRAPSFRCTERPEDGALILHYYSDRPGLEH 144


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 430 PTISLTRLFSKHFCRAQYTFFTNQ*SEGI 516
           P+I   +LF+    +  Y FFT + S  +
Sbjct: 459 PSIHFAQLFADRGMKVYYYFFTQRTSTNL 487


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +2

Query: 386 GARAQGSHSQGAPKDRQFLSHVYSQNIFVEH 478
           G RA        P+D   + H YS    +EH
Sbjct: 114 GMRAPSFRCTERPEDGALILHYYSDRPGLEH 144


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,101
Number of Sequences: 438
Number of extensions: 5074
Number of successful extensions: 22
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)