Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k11f
         (618 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    52   1e-05
UniRef50_A0CNE9 Cluster: Chromosome undetermined scaffold_22, wh...    33   7.2  
UniRef50_A5DM41 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 52.0 bits (119), Expect = 1e-05
 Identities = 23/28 (82%), Positives = 24/28 (85%)
 Frame = -3

Query: 472 FIWSCFLLLRWVDELTAHLVLSGYWSSK 389
           F  S FLLLRWVDELTAHLVLSGYWS +
Sbjct: 149 FCLSRFLLLRWVDELTAHLVLSGYWSPR 176


>UniRef50_A0CNE9 Cluster: Chromosome undetermined scaffold_22, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_22,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 472

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
 Frame = +3

Query: 3   FFFVYHSCFICGSSYIRPCQKEFGCRDCFRSRQNVATDFLFF----IA*MGGWVPILLMK 170
           FFF+ +   +CGSS I     EF C  CF   +N     L F    +  + G   IL++K
Sbjct: 347 FFFIIYF-LLCGSSAIMALTFEFSCELCFPLSENTTIAMLGFFGNLLNFLQGIPEILILK 405

Query: 171 YVLNKCSRLT 200
                CS +T
Sbjct: 406 GDNQLCSTMT 415


>UniRef50_A5DM41 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 323

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 22/76 (28%), Positives = 32/76 (42%)
 Frame = -1

Query: 549 LETVAPTPCMLIAIFNDLDSVKVNSNLYGVVFYCLDGWTSSQPTWC*VVTGVLRSQYSYN 370
           +ET A      I   +   +     +L+G   +CLDG   ++     V T    +  SY 
Sbjct: 79  VETTAEKSSASITSMSAQTTAVTGCHLHGATQFCLDG-KGNEGYMSPVPTNTKSAPVSYT 137

Query: 369 GCPTLQTETHYCYTAE 322
           GC    TET YC  A+
Sbjct: 138 GCHAHATET-YCLNAD 152


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,210,980
Number of Sequences: 1657284
Number of extensions: 14594812
Number of successful extensions: 31232
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31221
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)