Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k11f
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   0.89 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   1.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 295  CGLTRRPTTSNNANYNVADLIFIT 224
            C    R T  NNA +NVA+  F T
Sbjct: 1558 CWYHLRVTAHNNAGFNVAEYEFAT 1581


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 184 LLSTYFIRRIGTHPPI*AIKKRK 116
           L ST+F R +G+ PP   + K+K
Sbjct: 309 LFSTHFCRTLGSLPPFKWLFKKK 331


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 298 DKYHRPVYFCRVAV 339
           +KY+  +YFCR+ V
Sbjct: 327 EKYYNILYFCRIMV 340


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 572 SIFFPTYSRNLEGLF 616
           S  + TYSR L G+F
Sbjct: 92  SYIYTTYSRKLSGIF 106


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 572 SIFFPTYSRNLEGLF 616
           S  + TYSR L G+F
Sbjct: 48  SYIYTTYSRKLSGIF 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,968
Number of Sequences: 336
Number of extensions: 4007
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)