Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k09r
         (678 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24I06 Cluster: Putative uncharacterized protein; n=1; ...    39   0.097
UniRef50_Q94GM8 Cluster: Putative uncharacterized protein OSJNBb...    35   2.1  
UniRef50_Q20760 Cluster: Putative uncharacterized protein; n=2; ...    35   2.1  
UniRef50_Q4SU90 Cluster: Chromosome 3 SCAF13974, whole genome sh...    34   2.8  
UniRef50_A2FZK6 Cluster: Surface antigen BspA-like; n=4; Trichom...    33   6.4  
UniRef50_UPI0000F1E175 Cluster: PREDICTED: hypothetical protein;...    33   8.4  
UniRef50_Q4C725 Cluster: Putative uncharacterized protein; n=8; ...    33   8.4  
UniRef50_Q0E4A0 Cluster: Os02g0129000 protein; n=9; Oryza sativa...    33   8.4  

>UniRef50_Q24I06 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 943

 Score = 39.1 bits (87), Expect = 0.097
 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
 Frame = -1

Query: 612 GVINASPKVNDVHDKQQNCENSPQGHVFNEAQVIGTWHPQQHKS-KKTYAFGDSECVQLT 436
           G ++ S + N+ + KQQ C  S Q  V NE+QV  + +  + KS    Y        + +
Sbjct: 105 GALSRSIEENE-YKKQQKCGQSNQQSVLNESQVGKSKNISKQKSFLNDYKSSQQTLTKSS 163

Query: 435 SVNEQERNELKEMIGNYVDKMKWEN 361
             +EQ+ +++K  I N +D +K +N
Sbjct: 164 KKDEQQHSKVKFSIDNQIDSIKIKN 188


>UniRef50_Q94GM8 Cluster: Putative uncharacterized protein
           OSJNBb0052C09.3; n=2; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBb0052C09.3 - Oryza sativa subsp. japonica (Rice)
          Length = 643

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = -1

Query: 576 HDKQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGD-SECVQLTSVNEQERNELKE 400
           H +Q+N   + Q HV +E +   T H   HK+K+T+   D  + +++    +Q+ N++  
Sbjct: 503 HVEQENIVMNSQSHVQDEDKTPPTKHATAHKNKRTFGLNDHGKQMEIICAKKQQCNKMDF 562

Query: 399 MIGNYVD 379
           +  N ++
Sbjct: 563 ITDNSME 569


>UniRef50_Q20760 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 740

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = -3

Query: 454 RMCSINFGQRTGKKRIKRNDRELRRQNEMGELNSENANT 338
           R+ SI+FG   GKK +KR   + + + EM E+N +N NT
Sbjct: 594 RILSIDFG---GKKSLKRKMEDEQMEKEMAEMNDQNDNT 629


>UniRef50_Q4SU90 Cluster: Chromosome 3 SCAF13974, whole genome
           shotgun sequence; n=5; Tetraodontidae|Rep: Chromosome 3
           SCAF13974, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 280

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = +2

Query: 485 LCCCGCHVPITWASLKTWPCGEFSQFCCLSCTSLTFGDAFITPAANNTIRIHRR-CGDML 661
           L CCG H   +W +   +P   F   CC+S +  ++ D   +  A    ++H++ C  ++
Sbjct: 181 LRCCGVHNYTSWFNSVYFPVSGFPASCCVSFSDCSYADLKNSTLAAR--KVHKQGCYQLV 238

Query: 662 TS--ERN 676
           TS  ERN
Sbjct: 239 TSFIERN 245


>UniRef50_A2FZK6 Cluster: Surface antigen BspA-like; n=4;
           Trichomonas vaginalis G3|Rep: Surface antigen BspA-like
           - Trichomonas vaginalis G3
          Length = 896

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 488 CCCGCHVPITWASLKTWPCGEFSQFCCLSCTSLTFGDAFITPAAN 622
           C  GCH  I+    K     EF+ + CL  T+ TFGD  +  + N
Sbjct: 542 CFVGCHKLISVDCSKIENLNEFTFYLCLGNTTYTFGDKLVIISKN 586


>UniRef50_UPI0000F1E175 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 2524

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 26/92 (28%), Positives = 44/92 (47%)
 Frame = -1

Query: 339 PCPSDKHNVTKDYYLERLEGDGFYRTLNMPPPTAKLEFGVFRRYPIRLKIIENEYLGIMD 160
           P P + H ++K +Y E + GD   R   M P +  L  G   R P      ++E   IM 
Sbjct: 251 PTPDELHFLSKHFYTESISGDDHRRVTPMRPRSRSLSPG---RSP---SCCDHEI--IMM 302

Query: 159 CHVFLLGKEPSDGTKVDERLNKITQIYWPDDI 64
            HV+   + P    +++ER+ +I Q   P+++
Sbjct: 303 NHVY-KERFPKATAQMEERIKEIIQSNSPENV 333


>UniRef50_Q4C725 Cluster: Putative uncharacterized protein; n=8;
           Cyanobacteria|Rep: Putative uncharacterized protein -
           Crocosphaera watsonii
          Length = 320

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -1

Query: 396 IGNYV--DKMKWENLTLRMQIPCPSDKHNVTKDYYLERLEGDGFYRT 262
           + NYV  DK+ WEN      +    +K+  T  YY E +  D  YRT
Sbjct: 138 VDNYVFLDKISWENFNESCHLKEQVEKYKKTFGYYPESVHVDKIYRT 184


>UniRef50_Q0E4A0 Cluster: Os02g0129000 protein; n=9; Oryza
           sativa|Rep: Os02g0129000 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 750

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = -1

Query: 576 HDKQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGD-SECVQLTSVNEQERNELKE 400
           H +Q+N   + Q H  +E +   T H   HK+K+T+   D  + +++    EQ+ +++  
Sbjct: 588 HVEQENIVMNSQSHAQDEDKTPPTKHATAHKNKRTFGLNDHGKQMEIICAKEQQCSKMDF 647

Query: 399 MIGNYVD 379
           +  N ++
Sbjct: 648 ITDNSME 654


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,428,694
Number of Sequences: 1657284
Number of extensions: 14136206
Number of successful extensions: 38049
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 36574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38025
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)