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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k09r
         (678 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-7|CAA90257.1|  740|Caenorhabditis elegans Hypothetical pr...    35   0.061
Z81594-6|CAJ85771.1|  153|Caenorhabditis elegans Hypothetical pr...    31   0.76 
Z81594-5|CAJ85770.1|  262|Caenorhabditis elegans Hypothetical pr...    31   0.76 
Z81594-4|CAB04747.1|  282|Caenorhabditis elegans Hypothetical pr...    31   0.76 
U40952-2|AAA81737.1|  818|Caenorhabditis elegans Hypothetical pr...    31   1.00 
Z81085-2|CAB03114.2|  618|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z99942-1|CAB17068.2|  454|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AF067609-5|AAC17534.1|  644|Caenorhabditis elegans Hypothetical ...    29   3.0  
Z22180-7|CAE17863.1|  372|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p...    28   7.0  
U64860-1|AAB04991.1|  155|Caenorhabditis elegans Hypothetical pr...    28   7.0  
U50310-4|ABB51170.1|  409|Caenorhabditis elegans Hypothetical pr...    28   7.0  
U50310-3|AAA92540.4|  411|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z73898-9|CAA98066.2|  913|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z68159-10|CAD30432.1|  826|Caenorhabditis elegans Hypothetical p...    27   9.3  
Z68159-9|CAA92282.2|  844|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U70852-10|AAO91718.1|  505|Caenorhabditis elegans Hypothetical p...    27   9.3  
U70852-9|ABB51183.1|  784|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U70852-8|ABB51182.1|  868|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U23486-4|AAC46776.2|  261|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U21310-5|AAY86191.1|  148|Caenorhabditis elegans Hypothetical pr...    27   9.3  
AF339059-1|AAL50361.1|  826|Caenorhabditis elegans Rho guanine n...    27   9.3  
AF326352-1|AAL50355.1|  844|Caenorhabditis elegans putative Rho ...    27   9.3  
AB060647-1|BAB43906.1|  826|Caenorhabditis elegans putative GDP-...    27   9.3  

>Z49967-7|CAA90257.1|  740|Caenorhabditis elegans Hypothetical
           protein F54C9.9 protein.
          Length = 740

 Score = 34.7 bits (76), Expect = 0.061
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = -3

Query: 454 RMCSINFGQRTGKKRIKRNDRELRRQNEMGELNSENANT 338
           R+ SI+FG   GKK +KR   + + + EM E+N +N NT
Sbjct: 594 RILSIDFG---GKKSLKRKMEDEQMEKEMAEMNDQNDNT 629


>Z81594-6|CAJ85771.1|  153|Caenorhabditis elegans Hypothetical
           protein T20F10.2c protein.
          Length = 153

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = -1

Query: 618 AAGVINASPKVNDVHDKQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGDSECVQL 439
           AA + N +PK+    DKQ   +N+ + H   E +V  T    QH  ++     D++    
Sbjct: 53  AAHLNNLTPKIEKPKDKQAEEQNAEEQH--KEKEVTVTTVTTQHSREEAQVKEDNQAQST 110

Query: 438 TSVNEQE 418
           T+V   E
Sbjct: 111 TTVTSTE 117


>Z81594-5|CAJ85770.1|  262|Caenorhabditis elegans Hypothetical
           protein T20F10.2b protein.
          Length = 262

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = -1

Query: 618 AAGVINASPKVNDVHDKQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGDSECVQL 439
           AA + N +PK+    DKQ   +N+ + H   E +V  T    QH  ++     D++    
Sbjct: 162 AAHLNNLTPKIEKPKDKQAEEQNAEEQH--KEKEVTVTTVTTQHSREEAQVKEDNQAQST 219

Query: 438 TSVNEQE 418
           T+V   E
Sbjct: 220 TTVTSTE 226


>Z81594-4|CAB04747.1|  282|Caenorhabditis elegans Hypothetical
           protein T20F10.2a protein.
          Length = 282

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = -1

Query: 618 AAGVINASPKVNDVHDKQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGDSECVQL 439
           AA + N +PK+    DKQ   +N+ + H   E +V  T    QH  ++     D++    
Sbjct: 182 AAHLNNLTPKIEKPKDKQAEEQNAEEQH--KEKEVTVTTVTTQHSREEAQVKEDNQAQST 239

Query: 438 TSVNEQE 418
           T+V   E
Sbjct: 240 TTVTSTE 246


>U40952-2|AAA81737.1|  818|Caenorhabditis elegans Hypothetical
           protein C03B1.7 protein.
          Length = 818

 Score = 30.7 bits (66), Expect = 1.00
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = -1

Query: 531 FNEAQVIGTWHP-QQHKSKKTYAFGDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 355
           F E  ++   +P  Q +  +   F  S+C    S +    + +K+ + N++D  KWEN+ 
Sbjct: 23  FEETYLLKRVNPFAQTEEGRIIKFNSSDCPCGKSQDVHNISAMKDQLSNFLD--KWENVH 80

Query: 354 LRMQIPCPSDKHNVTK 307
            +  +P  S +   +K
Sbjct: 81  EKFSLPTGSSELTTSK 96


>Z81085-2|CAB03114.2|  618|Caenorhabditis elegans Hypothetical
           protein F46F3.2 protein.
          Length = 618

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
 Frame = -1

Query: 477 KTYAFGDSECVQLTSVNEQERNELKEMIGNYVDKMKW---ENLTLRMQIPCPS---DKHN 316
           +TY + D E  +L   N +E  E    IG  +D++ +   +++ + M   C S   D+  
Sbjct: 137 QTYNYSDPEVQELVLNNYEEAQE--NAIG--IDQLLFLDHQSVMIVMPAACNSSNSDEKE 192

Query: 315 VTKDYYLERLEGDGFYRTLNMPPPTAKLEFGVFRRYPIRLKIIENEYLGI 166
           ++K YYLE+  GD  +   N+     KL   V    P  L  I N+ LG+
Sbjct: 193 ISKQYYLEKY-GDFSFNVSNLNIELDKLHEMVHDFKP--LDQIMNQNLGL 239


>Z99942-1|CAB17068.2|  454|Caenorhabditis elegans Hypothetical
           protein H13N06.2 protein.
          Length = 454

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
 Frame = -1

Query: 669 SDVNMSPQRRCILIVLLAAGVINASPKVNDVHDKQQ----NCENSPQGHVFNEAQVIGTW 502
           ++ NM  ++    ++ + + V     K++++ D ++    N ENS +G   NE +++ T 
Sbjct: 148 TETNMKTEKPDKGVLKILSPVFEDITKIDNISDSEEVLRVNSENSVEGSGDNEPELMTTL 207

Query: 501 HPQQHKSKKTYAFGDSECVQLTSVNEQERNELKEMI 394
                 SKK+  F  +   + +SV       + E I
Sbjct: 208 ETTTTSSKKSSEFTTTMTPESSSVTTTTAKPVTEPI 243


>AF067609-5|AAC17534.1|  644|Caenorhabditis elegans Hypothetical
           protein C23H5.7 protein.
          Length = 644

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -1

Query: 522 AQVIGTWHPQQHK-SKKTYAFGDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLTLRM 346
           A +IG+W P QHK S K+   G    V   S   Q  NE ++M+      MK+  +   +
Sbjct: 317 ATIIGSWLPTQHKNSPKSEISGVGSVVTQMS---QTVNEFRQMMDGIKFYMKYREVNSAI 373

Query: 345 Q 343
           Q
Sbjct: 374 Q 374


>Z22180-7|CAE17863.1|  372|Caenorhabditis elegans Hypothetical
           protein K11H3.7 protein.
          Length = 372

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 536 WPCGEFSQFCCLSCTSLTFGDAFITPAANNT 628
           W   E   FC +S T++ FGD F + + +NT
Sbjct: 291 WTFLESFYFCFISLTTIGFGDKFPSTSVSNT 321


>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
           protein T20D3.11 protein.
          Length = 1843

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 369 WENLTLRMQIPCPSDKHNVTK 307
           WE L LR  +P P+D++ +TK
Sbjct: 123 WEQLLLRKLLPSPADRNMLTK 143


>U64860-1|AAB04991.1|  155|Caenorhabditis elegans Hypothetical
           protein R106.1 protein.
          Length = 155

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
 Frame = +2

Query: 482 DLCCCGCHVPITWASLKTWPCGE-FSQFCCLSCT 580
           D CCCG H P   A L        F  F CL C+
Sbjct: 53  DQCCCGDHAPSLSAMLPVLISRHIFYTFLCLLCS 86


>U50310-4|ABB51170.1|  409|Caenorhabditis elegans Hypothetical
           protein ZC487.1b protein.
          Length = 409

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -1

Query: 369 WENLTLRMQI-PCPSDKHNVTKDYYL 295
           WE +TL  Q+ P P D  N+ K+Y+L
Sbjct: 278 WEVMTLTAQLGPQPEDVDNIDKNYHL 303


>U50310-3|AAA92540.4|  411|Caenorhabditis elegans Hypothetical
           protein ZC487.1a protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -1

Query: 369 WENLTLRMQI-PCPSDKHNVTKDYYL 295
           WE +TL  Q+ P P D  N+ K+Y+L
Sbjct: 280 WEVMTLTAQLGPQPEDVDNIDKNYHL 305


>Z73898-9|CAA98066.2|  913|Caenorhabditis elegans Hypothetical
           protein ZK822.1 protein.
          Length = 913

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 345 QIPCPSDKHNVTKDYYLERLEGDG 274
           +IP PS +H   K  +LERL+G G
Sbjct: 888 RIPTPSSRHGNEKRGWLERLKGIG 911


>Z68159-10|CAD30432.1|  826|Caenorhabditis elegans Hypothetical
           protein C33D9.1b protein.
          Length = 826

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -1

Query: 462 GDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 355
           G   CV+L +  ++E+N+  + I + +D+ K  +LT
Sbjct: 586 GPKRCVELFTPTQKEKNDWVDSIFSIIDEAKAHSLT 621


>Z68159-9|CAA92282.2|  844|Caenorhabditis elegans Hypothetical
           protein C33D9.1a protein.
          Length = 844

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -1

Query: 462 GDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 355
           G   CV+L +  ++E+N+  + I + +D+ K  +LT
Sbjct: 586 GPKRCVELFTPTQKEKNDWVDSIFSIIDEAKAHSLT 621


>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical
           protein C13F10.4 protein.
          Length = 2076

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = +2

Query: 533 TWPCGEFSQFCCLSCTSLTFGDAFITPAANN--TIRIHRRCGDMLTSERN 676
           TWP  +     CL+   LT+G  F  P  NN   ++I     D +   +N
Sbjct: 787 TWPENDSEPLTCLNTALLTYGKVF--PLVNNKHKVQITEHFWDTIQKSKN 834


>U70852-10|AAO91718.1|  505|Caenorhabditis elegans Hypothetical
           protein F45E4.7b protein.
          Length = 505

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 22/89 (24%), Positives = 33/89 (37%)
 Frame = -1

Query: 534 VFNEAQVIGTWHPQQHKSKKTYAFGDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 355
           V N    +  W+ +Q+       +G  ECV   S  E  R    +     +D  K +   
Sbjct: 173 VANYLLTVTVWNLKQYSYSPRDQYGWRECVDQISSFEIGRKMYVDKASQTIDLPKIQEFL 232

Query: 354 LRMQIPCPSDKHNVTKDYYLERLEGDGFY 268
             ++I   S  H  T   YL  +   GFY
Sbjct: 233 QNLKIDFLS-VHRSTPLQYLSNINRLGFY 260


>U70852-9|ABB51183.1|  784|Caenorhabditis elegans Hypothetical
           protein F45E4.7c protein.
          Length = 784

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 22/89 (24%), Positives = 33/89 (37%)
 Frame = -1

Query: 534 VFNEAQVIGTWHPQQHKSKKTYAFGDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 355
           V N    +  W+ +Q+       +G  ECV   S  E  R    +     +D  K +   
Sbjct: 452 VANYLLTVTVWNLKQYSYSPRDQYGWRECVDQISSFEIGRKMYVDKASQTIDLPKIQEFL 511

Query: 354 LRMQIPCPSDKHNVTKDYYLERLEGDGFY 268
             ++I   S  H  T   YL  +   GFY
Sbjct: 512 QNLKIDFLS-VHRSTPLQYLSNINRLGFY 539


>U70852-8|ABB51182.1|  868|Caenorhabditis elegans Hypothetical
           protein F45E4.7a protein.
          Length = 868

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 22/89 (24%), Positives = 33/89 (37%)
 Frame = -1

Query: 534 VFNEAQVIGTWHPQQHKSKKTYAFGDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 355
           V N    +  W+ +Q+       +G  ECV   S  E  R    +     +D  K +   
Sbjct: 536 VANYLLTVTVWNLKQYSYSPRDQYGWRECVDQISSFEIGRKMYVDKASQTIDLPKIQEFL 595

Query: 354 LRMQIPCPSDKHNVTKDYYLERLEGDGFY 268
             ++I   S  H  T   YL  +   GFY
Sbjct: 596 QNLKIDFLS-VHRSTPLQYLSNINRLGFY 623


>U23486-4|AAC46776.2|  261|Caenorhabditis elegans Hypothetical
           protein F07F6.2 protein.
          Length = 261

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
 Frame = -3

Query: 601 RVSESQRCTRQAAKL*KFSARPRLQRSPGYWHMAPATTQIKENLRIRGLRMCSINFGQRT 422
           R+   +   RQ  K  + + R +       WH+  A   +K  +   GL+   + F ++ 
Sbjct: 156 RIPSKEEVDRQTLKFKEEARRIKRLMIEEDWHVKEANEDVKNKIEQEGLKRKDMEFEEQL 215

Query: 421 GKKRI---KRNDRELRRQNE 371
              RI   KR ++ L+++ E
Sbjct: 216 YHLRIEKVKRREQVLKQKLE 235


>U21310-5|AAY86191.1|  148|Caenorhabditis elegans Hypothetical
           protein F40H6.6 protein.
          Length = 148

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
 Frame = -1

Query: 594 PKVNDVHD----KQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGD 457
           PK+ND+ D    K +NCE+      +   QV GT  P+       +  GD
Sbjct: 22  PKMNDIIDWKTWKTRNCESRRNPSFYRHRQVAGTVAPKAPLIHHNHHTGD 71


>AF339059-1|AAL50361.1|  826|Caenorhabditis elegans Rho guanine
           nucleotide exchangefactor FGD-1 protein.
          Length = 826

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -1

Query: 462 GDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 355
           G   CV+L +  ++E+N+  + I + +D+ K  +LT
Sbjct: 586 GPKRCVELFTPTQKEKNDWVDSIFSIIDEAKAHSLT 621


>AF326352-1|AAL50355.1|  844|Caenorhabditis elegans putative Rho
           guanine nucleotideexchange factor FGD-1 protein.
          Length = 844

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -1

Query: 462 GDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 355
           G   CV+L +  ++E+N+  + I + +D+ K  +LT
Sbjct: 586 GPKRCVELFTPTQKEKNDWVDSIFSIIDEAKAHSLT 621


>AB060647-1|BAB43906.1|  826|Caenorhabditis elegans putative GDP-GTP
           exchange factor protein.
          Length = 826

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -1

Query: 462 GDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 355
           G   CV+L +  ++E+N+  + I + +D+ K  +LT
Sbjct: 586 GPKRCVELFTPTQKEKNDWVDSIFSIIDEAKAHSLT 621


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,743,856
Number of Sequences: 27780
Number of extensions: 352886
Number of successful extensions: 1069
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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