Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k09f
         (584 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24I06 Cluster: Putative uncharacterized protein; n=1; ...    39   0.076
UniRef50_Q94GM8 Cluster: Putative uncharacterized protein OSJNBb...    35   1.6  
UniRef50_Q20760 Cluster: Putative uncharacterized protein; n=2; ...    35   1.6  
UniRef50_Q4SU90 Cluster: Chromosome 3 SCAF13974, whole genome sh...    34   2.2  
UniRef50_A2FZK6 Cluster: Surface antigen BspA-like; n=4; Trichom...    33   5.0  
UniRef50_Q4C725 Cluster: Putative uncharacterized protein; n=8; ...    33   6.6  
UniRef50_Q0E4A0 Cluster: Os02g0129000 protein; n=9; Oryza sativa...    33   6.6  
UniRef50_UPI00006CC840 Cluster: hypothetical protein TTHERM_0028...    32   8.7  
UniRef50_UPI00006CAA87 Cluster: hypothetical protein TTHERM_0067...    32   8.7  

>UniRef50_Q24I06 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 943

 Score = 39.1 bits (87), Expect = 0.076
 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
 Frame = +1

Query: 67  GVINASPKVNDVHDKQQNCENSPQGHVFNEAQVIGTWHPQQHKS-KKTYAFGDSECVQLT 243
           G ++ S + N+ + KQQ C  S Q  V NE+QV  + +  + KS    Y        + +
Sbjct: 105 GALSRSIEENE-YKKQQKCGQSNQQSVLNESQVGKSKNISKQKSFLNDYKSSQQTLTKSS 163

Query: 244 SVNEQERNELKEMIGNYVDKMKWEN 318
             +EQ+ +++K  I N +D +K +N
Sbjct: 164 KKDEQQHSKVKFSIDNQIDSIKIKN 188


>UniRef50_Q94GM8 Cluster: Putative uncharacterized protein
           OSJNBb0052C09.3; n=2; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBb0052C09.3 - Oryza sativa subsp. japonica (Rice)
          Length = 643

 Score = 34.7 bits (76), Expect = 1.6
 Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = +1

Query: 103 HDKQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGD-SECVQLTSVNEQERNELKE 279
           H +Q+N   + Q HV +E +   T H   HK+K+T+   D  + +++    +Q+ N++  
Sbjct: 503 HVEQENIVMNSQSHVQDEDKTPPTKHATAHKNKRTFGLNDHGKQMEIICAKKQQCNKMDF 562

Query: 280 MIGNYVD 300
           +  N ++
Sbjct: 563 ITDNSME 569


>UniRef50_Q20760 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 740

 Score = 34.7 bits (76), Expect = 1.6
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = +3

Query: 225 RMCSINFGQRTGKKRIKRNDRELRRQNEMGELNSENANT 341
           R+ SI+FG   GKK +KR   + + + EM E+N +N NT
Sbjct: 594 RILSIDFG---GKKSLKRKMEDEQMEKEMAEMNDQNDNT 629


>UniRef50_Q4SU90 Cluster: Chromosome 3 SCAF13974, whole genome
           shotgun sequence; n=5; Tetraodontidae|Rep: Chromosome 3
           SCAF13974, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 280

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = -1

Query: 194 LCCCGCHVPITWASLKTWPCGEFSQFCCLSCTSLTFGDAFITPAANNTIRIHRR-CGDML 18
           L CCG H   +W +   +P   F   CC+S +  ++ D   +  A    ++H++ C  ++
Sbjct: 181 LRCCGVHNYTSWFNSVYFPVSGFPASCCVSFSDCSYADLKNSTLAAR--KVHKQGCYQLV 238

Query: 17  TS--ERN 3
           TS  ERN
Sbjct: 239 TSFIERN 245


>UniRef50_A2FZK6 Cluster: Surface antigen BspA-like; n=4;
           Trichomonas vaginalis G3|Rep: Surface antigen BspA-like
           - Trichomonas vaginalis G3
          Length = 896

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -1

Query: 191 CCCGCHVPITWASLKTWPCGEFSQFCCLSCTSLTFGDAFITPAAN 57
           C  GCH  I+    K     EF+ + CL  T+ TFGD  +  + N
Sbjct: 542 CFVGCHKLISVDCSKIENLNEFTFYLCLGNTTYTFGDKLVIISKN 586


>UniRef50_Q4C725 Cluster: Putative uncharacterized protein; n=8;
           Cyanobacteria|Rep: Putative uncharacterized protein -
           Crocosphaera watsonii
          Length = 320

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +1

Query: 283 IGNYV--DKMKWENLTLRMQIPCPSDKHNVTKDYYLERLEGDGFYRT 417
           + NYV  DK+ WEN      +    +K+  T  YY E +  D  YRT
Sbjct: 138 VDNYVFLDKISWENFNESCHLKEQVEKYKKTFGYYPESVHVDKIYRT 184


>UniRef50_Q0E4A0 Cluster: Os02g0129000 protein; n=9; Oryza
           sativa|Rep: Os02g0129000 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 750

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +1

Query: 103 HDKQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGD-SECVQLTSVNEQERNELKE 279
           H +Q+N   + Q H  +E +   T H   HK+K+T+   D  + +++    EQ+ +++  
Sbjct: 588 HVEQENIVMNSQSHAQDEDKTPPTKHATAHKNKRTFGLNDHGKQMEIICAKEQQCSKMDF 647

Query: 280 MIGNYVD 300
           +  N ++
Sbjct: 648 ITDNSME 654


>UniRef50_UPI00006CC840 Cluster: hypothetical protein TTHERM_00285650;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00285650 - Tetrahymena thermophila SB210
          Length = 1866

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
 Frame = +1

Query: 10   SDVNMSPQRRCILIVLLAAGVINASPKVNDVHDKQQNC-ENSPQGHV-FNEAQVIGTWHP 183
            S++N    R  IL +           ++N +H   ++  +N+   ++  N+ Q   T H 
Sbjct: 1114 SNLNTYTPREKILSLGEKTSTETQRNQMNQIHSSNKSLLKNNDLNYLQMNDTQNQQTSHN 1173

Query: 184  QQHKSKKTYAFGDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLTLRMQIPCPSDKHN 363
             QH SK    F      +LTS N ++RN  +    N+      E +         SDKHN
Sbjct: 1174 LQHASK----FQPKSAKKLTSKNNKQRNSQQAKFNNFQQTFYQEQMNF-------SDKHN 1222

Query: 364  V 366
            +
Sbjct: 1223 I 1223


>UniRef50_UPI00006CAA87 Cluster: hypothetical protein
           TTHERM_00670330; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00670330 - Tetrahymena
           thermophila SB210
          Length = 308

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +1

Query: 241 TSVNEQERNELKEMIGN--YVDKMKWENLTLRMQIPCPSDKHNVTKDYYLERLEGDGFYR 414
           T + ++ RN   E + N  Y+ K KWENLT R+       K  + ++  + + E D FYR
Sbjct: 198 TKMVQKTRNFYGEDLWNIKYLPKFKWENLTERLNYQNRVRKEKLQQELQISKKEQD-FYR 256


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,103,426
Number of Sequences: 1657284
Number of extensions: 12229647
Number of successful extensions: 33888
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 32730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33865
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)