Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10k08r
(723 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC107478-1|AAI07479.1| 416|Homo sapiens C6orf205 protein protein. 32 2.4
BC105737-1|AAI05738.1| 566|Homo sapiens chromosome 6 open readi... 32 2.4
BC105735-1|AAI05736.1| 566|Homo sapiens chromosome 6 open readi... 32 2.4
AL669830-8|CAI18008.1| 566|Homo sapiens chromosome 6 open readi... 32 2.4
AL663093-1|CAI17705.1| 566|Homo sapiens chromosome 6 open readi... 32 2.4
AB158503-1|BAD69710.1| 151|Homo sapiens splice variant of four ... 31 5.5
>BC107478-1|AAI07479.1| 416|Homo sapiens C6orf205 protein protein.
Length = 416
Score = 31.9 bits (69), Expect = 2.4
Identities = 42/166 (25%), Positives = 66/166 (39%)
Frame = -3
Query: 697 TIASSSPITTVRLKRASIYTRRRRAKSSQMS*TN*YETTR*TAWSTPINFGSRAPRTSSG 518
T +S TT + + S + TN +T + ST N GS TSSG
Sbjct: 164 TATNSESSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSST--TSSG 221
Query: 517 IVSQLSSDLSSPKTRLSLCTSATVSL*R*AMMFKATMADLPTATARTRQARESAGS*SLC 338
+ +S+ S+ + S T++ S + AT ++ T ++ A S S +
Sbjct: 222 TSTATNSESSTVSSGASTATTSESSTTS-SGASTATNSESSTVSSGASTATNSESSTTSS 280
Query: 337 GXXXXXXXXXXTLNVTNTWYWESALTGTATIWPSESTASIVSEPSG 200
G +VT+ +ALTG T S STA ++P G
Sbjct: 281 GANTATNSGS---SVTSAGSGTAALTGMHTTSHSASTAVSEAKPGG 323
>BC105737-1|AAI05738.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 31.9 bits (69), Expect = 2.4
Identities = 42/166 (25%), Positives = 66/166 (39%)
Frame = -3
Query: 697 TIASSSPITTVRLKRASIYTRRRRAKSSQMS*TN*YETTR*TAWSTPINFGSRAPRTSSG 518
T +S TT + + S + TN +T + ST N GS TSSG
Sbjct: 314 TATNSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSST--TSSG 371
Query: 517 IVSQLSSDLSSPKTRLSLCTSATVSL*R*AMMFKATMADLPTATARTRQARESAGS*SLC 338
+ +S+ S+ + S T++ S + AT ++ T ++ A S S +
Sbjct: 372 TSTATNSESSTVSSGASTATTSESSTTS-SGASTATNSESSTVSSGASTATNSESSTTSS 430
Query: 337 GXXXXXXXXXXTLNVTNTWYWESALTGTATIWPSESTASIVSEPSG 200
G +VT+ +ALTG T S STA ++P G
Sbjct: 431 GANTATNSGS---SVTSAGSGTAALTGMHTTSHSASTAVSEAKPGG 473
>BC105735-1|AAI05736.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 31.9 bits (69), Expect = 2.4
Identities = 42/166 (25%), Positives = 66/166 (39%)
Frame = -3
Query: 697 TIASSSPITTVRLKRASIYTRRRRAKSSQMS*TN*YETTR*TAWSTPINFGSRAPRTSSG 518
T +S TT + + S + TN +T + ST N GS TSSG
Sbjct: 314 TATNSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSST--TSSG 371
Query: 517 IVSQLSSDLSSPKTRLSLCTSATVSL*R*AMMFKATMADLPTATARTRQARESAGS*SLC 338
+ +S+ S+ + S T++ S + AT ++ T ++ A S S +
Sbjct: 372 TSTATNSESSTVSSGASTATTSESSTTS-SGASTATNSESSTVSSGASTATNSESSTTSS 430
Query: 337 GXXXXXXXXXXTLNVTNTWYWESALTGTATIWPSESTASIVSEPSG 200
G +VT+ +ALTG T S STA ++P G
Sbjct: 431 GANTATNSGS---SVTSAGSGTAALTGMHTTSHSASTAVSEAKPGG 473
>AL669830-8|CAI18008.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 31.9 bits (69), Expect = 2.4
Identities = 42/166 (25%), Positives = 66/166 (39%)
Frame = -3
Query: 697 TIASSSPITTVRLKRASIYTRRRRAKSSQMS*TN*YETTR*TAWSTPINFGSRAPRTSSG 518
T +S TT + + S + TN +T + ST N GS TSSG
Sbjct: 314 TATNSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSST--TSSG 371
Query: 517 IVSQLSSDLSSPKTRLSLCTSATVSL*R*AMMFKATMADLPTATARTRQARESAGS*SLC 338
+ +S+ S+ + S T++ S + AT ++ T ++ A S S +
Sbjct: 372 TSTATNSESSTVSSGASTATTSESSTTS-SGASTATNSESSTVSSGASTATNSESSTTSS 430
Query: 337 GXXXXXXXXXXTLNVTNTWYWESALTGTATIWPSESTASIVSEPSG 200
G +VT+ +ALTG T S STA ++P G
Sbjct: 431 GANTATNSGS---SVTSAGSGTAALTGMHTTSHSASTAVSEAKPGG 473
>AL663093-1|CAI17705.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 31.9 bits (69), Expect = 2.4
Identities = 42/166 (25%), Positives = 66/166 (39%)
Frame = -3
Query: 697 TIASSSPITTVRLKRASIYTRRRRAKSSQMS*TN*YETTR*TAWSTPINFGSRAPRTSSG 518
T +S TT + + S + TN +T + ST N GS TSSG
Sbjct: 314 TATNSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSST--TSSG 371
Query: 517 IVSQLSSDLSSPKTRLSLCTSATVSL*R*AMMFKATMADLPTATARTRQARESAGS*SLC 338
+ +S+ S+ + S T++ S + AT ++ T ++ A S S +
Sbjct: 372 TSTATNSESSTVSSGASTATTSESSTTS-SGASTATNSESSTVSSGASTATNSESSTTSS 430
Query: 337 GXXXXXXXXXXTLNVTNTWYWESALTGTATIWPSESTASIVSEPSG 200
G +VT+ +ALTG T S STA ++P G
Sbjct: 431 GANTATNSGS---SVTSAGSGTAALTGMHTTSHSASTAVSEAKPGG 473
>AB158503-1|BAD69710.1| 151|Homo sapiens splice variant of four and
a half LIM domain protein 2 protein.
Length = 151
Score = 30.7 bits (66), Expect = 5.5
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 568 WSTPINFGSRAPRTSSGIVSQLSSDLSSPKT-RLSLC 461
WST G R +++ SQL +SSPKT R+S+C
Sbjct: 57 WSTRAAAGMRPASSATAASSQLEPRVSSPKTIRISVC 93
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,119,022
Number of Sequences: 237096
Number of extensions: 1859296
Number of successful extensions: 4962
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4960
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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