Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k07r
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    28   0.37 
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    28   0.37 
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    27   0.64 
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    27   0.64 
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    27   0.84 
AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    26   1.5  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   3.4  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   4.5  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   7.9  

>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 27.9 bits (59), Expect = 0.37
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +1

Query: 442 STEHNLASVHTVFLREEVVLAAATSAVVEGNAHPLHGHEGPALVQSSARP 591
           +T H+    H     + V    A  A+ + +A  ++ H  PA+V++ A+P
Sbjct: 29  ATSHSTIQHHAAPTIQHVGSVHAAPAIYQHSAPAIYQHSAPAIVKTIAQP 78


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 27.9 bits (59), Expect = 0.37
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +1

Query: 442 STEHNLASVHTVFLREEVVLAAATSAVVEGNAHPLHGHEGPALVQSSARP 591
           +T H+    H     + V    A  A+ + +A  ++ H  PA+V++ A+P
Sbjct: 29  ATSHSTIQHHAAPTIQHVGSVHAAPAIYQHSAPAIYQHSAPAIVKTIAQP 78


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 27.1 bits (57), Expect = 0.64
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = +1

Query: 442 STEHNLASVHTVFLREEVVLAAATSAVVEGNAHPLHGHEGPALVQSSARP 591
           +T H+    H       V    A  A+ + +A  ++ H  PA+V++ A+P
Sbjct: 29  ATSHSTIQHHAAPAIHHVGSVHAAPAIYQHSAPAIYQHSAPAIVKTIAQP 78


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 27.1 bits (57), Expect = 0.64
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = +1

Query: 442 STEHNLASVHTVFLREEVVLAAATSAVVEGNAHPLHGHEGPALVQSSARP 591
           +T H+    H       V    A  A+ + +A  ++ H  PA+V++ A+P
Sbjct: 29  ATSHSTIQHHAAPAIHHVGSVHAAPAIYQHSAPAIYQHSAPAIVKTIAQP 78


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 26.6 bits (56), Expect = 0.84
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = +1

Query: 442 STEHNLASVHTVFLREEVVLAAATSAVVEGNAHPLHGHEGPALVQSSARP 591
           +T H+    H       V    A  A+ + +A  ++ H  PA+V++ A+P
Sbjct: 29  ATSHSSIQHHAAPAIHHVGSVHAAPAIYQHSAPAIYQHSAPAIVKTIAQP 78


>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +1

Query: 442 STEHNLASVHTVFLREEVVLAAATSAVVEGNAHPLHGHEGPALVQSSA 585
           +T H+    H     + V    A  A+ + +A  ++ H  PA+ Q SA
Sbjct: 29  ATSHSTIQHHAAPAIQHVGSVHAAPAIYQHSAPAIYQHSAPAIYQHSA 76


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
 Frame = -1

Query: 330 GGPTLTGSPGDCQVSQWSDW--SKCSQPCGVGYQERVR---TILAQPGPGGVPCPK 178
           G P LTG  G+  +  W D   S  S P G   ++  R    ++ +PG  G+P P+
Sbjct: 562 GPPGLTGEKGEPGLPVWKDRGPSGPSGPLGPQGEKGDRGDSGLMGRPGNDGLPGPQ 617


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
 Frame = -3

Query: 523  LRRMSRQPEQLPHARRLYEHLQDYARWSSA--GGISAFAG--TSTVARRQFQLSRTQ 365
            + R  R+ ++  H R  Y  + D  RW S   GG+  F     S+     +QL R Q
Sbjct: 851  MERWQREWDESVHGRWTYRLIPDVNRWISRRFGGVDFFLSQFLSSHGFYAYQLHRMQ 907


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 602  NPLKGRAEDCTSAGPSWP 549
            NPLKG+  +C S+G   P
Sbjct: 1140 NPLKGKLTNCHSSGCERP 1157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,175
Number of Sequences: 2352
Number of extensions: 14722
Number of successful extensions: 32
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)