Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k07r
         (768 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g17330.1 68417.m02600 agenet domain-containing protein contai...    29   3.4  
At4g16170.1 68417.m02455 expressed protein                             29   3.4  
At1g50050.1 68414.m05616 pathogenesis-related protein, putative ...    28   6.0  
At2g39850.1 68415.m04894 subtilase family protein contains simil...    28   7.9  

>At4g17330.1 68417.m02600 agenet domain-containing protein contains
           Pfam PF05641: Agenet domain
          Length = 1058

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -3

Query: 265 VQPALRSRLPGARQDYSCTARPGRSAVSEANVAAPTVLQAVL 140
           +QP  + RL  A    +  A   ++A + ANVAA   LQA L
Sbjct: 340 LQPETQDRLASAAVAIAAAAAVAKAAAAAANVAANAALQAKL 381


>At4g16170.1 68417.m02455 expressed protein
          Length = 429

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = +1

Query: 520 VVEGNAHPLHGHEGPALVQSSARPLSGFLHTYAFGGEHV 636
           V+ G AHPLH HE  A+  S A        T   G  HV
Sbjct: 9   VIVGGAHPLHRHEKLAIAVSKAMRGHSLQETKKDGRFHV 47


>At1g50050.1 68414.m05616 pathogenesis-related protein, putative
           similar to pathogenesis-related protein 1b precursor
           (pr-1b) GB:X03465 GI:19977 from [Nicotiana tabacum];
           contains Pfam profile PF00188: SCP-like extracellular
           protein
          Length = 226

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -3

Query: 253 LRSRLPGARQDYSCTARPGRSAVSEANVAAPTVLQAVLSTHTNK*KL 113
           L +    A+QDY  T    R+ V  ANV   TV+ A  + + N  K+
Sbjct: 19  LATNAQNAQQDYLNTHNTARAQVGVANVVWDTVVAAYATNYANARKV 65


>At2g39850.1 68415.m04894 subtilase family protein contains
           similarity to subtilisin-like protease C1 GI:13325079
           from [Glycine max]
          Length = 774

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -3

Query: 541 DVHSLQLRRMSRQPEQLPHARRLYEHLQDYARWSSAGGISAFAGTST 401
           D   L+   MS      PHA  L  +L+ + RWS +   SA   TS+
Sbjct: 537 DYRHLRFNIMSGTSMACPHATGLALYLKSFKRWSPSAIKSALMTTSS 583


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,488,044
Number of Sequences: 28952
Number of extensions: 294057
Number of successful extensions: 719
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)