BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10k07f (601 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical pr... 80 1e-15 AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 30 1.5 AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 1.5 AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 1.5 AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family ... 30 1.5 AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family ... 30 1.5 AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family ... 30 1.5 AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family ... 30 1.5 AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family ... 30 1.5 Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 3.3 Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 3.3 Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 29 3.3 Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 3.3 Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 3.3 Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 29 3.3 X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 29 3.3 L15314-2|AAF99983.1| 322|Caenorhabditis elegans Hypothetical pr... 29 3.3 Z97628-3|CAB10727.1| 819|Caenorhabditis elegans Hypothetical pr... 28 4.4 Z79755-13|CAB02114.1| 819|Caenorhabditis elegans Hypothetical p... 28 4.4 Z79753-4|CAB02084.2| 396|Caenorhabditis elegans Hypothetical pr... 28 4.4 AC087079-13|AAK27866.1| 787|Caenorhabditis elegans Nuclear pore... 28 4.4 AC006638-10|AAK85488.1| 242|Caenorhabditis elegans Hypothetical... 28 5.9 AF098987-5|ABD63222.1| 263|Caenorhabditis elegans Hypothetical ... 27 7.7 AF098987-4|AAC67429.1| 496|Caenorhabditis elegans Hypothetical ... 27 7.7 >U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical protein F10E7.4 protein. Length = 819 Score = 80.2 bits (189), Expect = 1e-15 Identities = 60/176 (34%), Positives = 81/176 (46%), Gaps = 16/176 (9%) Frame = +2 Query: 122 CELNPGPGVGSKSPGDNHYRLIVNGEVER-------YAPDQRYVVTLVGSRTHDVVQQFA 280 C + P G KSPG N Y + +NG + + P + Y V++ G RT V+ F Sbjct: 27 CTIKPYEAKGDKSPGSNGYVIEINGTTTKSMDISKGFVPGEIYKVSIRGWRTQYTVKTFR 86 Query: 281 GFKIILDPLNPDTRRAPSKQGQFQLFADTLTKFDEECTNSVVEADDLP-KTEVQVMWKAP 457 GF ++ L D A S Q + D + C S V +L KT V +MWKAP Sbjct: 87 GF--VVSSLFEDNTSAGSWQ-VVKGHGDA--RISPGCRQSGVSHANLKSKTSVHMMWKAP 141 Query: 458 PAGSGCVLLKAMVYENASRWFAEDGQLTKRIC--EDTSLSIP------DCCACDDA 601 SGCV+ +A V E WF E LT ++C + T + P CCACD A Sbjct: 142 EVSSGCVVFRASVIETKYIWFTEAEGLTVKLCIQKGTQILKPVDDPSATCCACDIA 197 >AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein protein. Length = 10578 Score = 29.9 bits (64), Expect = 1.5 Identities = 30/121 (24%), Positives = 48/121 (39%) Frame = +2 Query: 101 LVSAALACELNPGPGVGSKSPGDNHYRLIVNGEVERYAPDQRYVVTLVGSRTHDVVQQFA 280 +V +A+ + VGS S R+ E + P + ++ V FA Sbjct: 509 IVESAVTVTCSHEEDVGSHSSLQTVRRIQEMQEEDEVDPIKPFIEATSPKVKESVEHPFA 568 Query: 281 GFKIILDPLNPDTRRAPSKQGQFQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKAPP 460 IL+P + R +PS +G+ LFA +T E +++ L K V PP Sbjct: 569 N---ILNPKKREERLSPSGKGKHLLFAPRITAHPSESVFKILDGSPL-KLRVMAS-SLPP 623 Query: 461 A 463 A Sbjct: 624 A 624 >AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein protein. Length = 18519 Score = 29.9 bits (64), Expect = 1.5 Identities = 30/121 (24%), Positives = 48/121 (39%) Frame = +2 Query: 101 LVSAALACELNPGPGVGSKSPGDNHYRLIVNGEVERYAPDQRYVVTLVGSRTHDVVQQFA 280 +V +A+ + VGS S R+ E + P + ++ V FA Sbjct: 509 IVESAVTVTCSHEEDVGSHSSLQTVRRIQEMQEEDEVDPIKPFIEATSPKVKESVEHPFA 568 Query: 281 GFKIILDPLNPDTRRAPSKQGQFQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKAPP 460 IL+P + R +PS +G+ LFA +T E +++ L K V PP Sbjct: 569 N---ILNPKKREERLSPSGKGKHLLFAPRITAHPSESVFKILDGSPL-KLRVMAS-SLPP 623 Query: 461 A 463 A Sbjct: 624 A 624 >AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein protein. Length = 18534 Score = 29.9 bits (64), Expect = 1.5 Identities = 30/121 (24%), Positives = 48/121 (39%) Frame = +2 Query: 101 LVSAALACELNPGPGVGSKSPGDNHYRLIVNGEVERYAPDQRYVVTLVGSRTHDVVQQFA 280 +V +A+ + VGS S R+ E + P + ++ V FA Sbjct: 509 IVESAVTVTCSHEEDVGSHSSLQTVRRIQEMQEEDEVDPIKPFIEATSPKVKESVEHPFA 568 Query: 281 GFKIILDPLNPDTRRAPSKQGQFQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKAPP 460 IL+P + R +PS +G+ LFA +T E +++ L K V PP Sbjct: 569 N---ILNPKKREERLSPSGKGKHLLFAPRITAHPSESVFKILDGSPL-KLRVMAS-SLPP 623 Query: 461 A 463 A Sbjct: 624 A 624 >AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family protein 1, isoform g protein. Length = 1769 Score = 29.9 bits (64), Expect = 1.5 Identities = 30/121 (24%), Positives = 48/121 (39%) Frame = +2 Query: 101 LVSAALACELNPGPGVGSKSPGDNHYRLIVNGEVERYAPDQRYVVTLVGSRTHDVVQQFA 280 +V +A+ + VGS S R+ E + P + ++ V FA Sbjct: 509 IVESAVTVTCSHEEDVGSHSSLQTVRRIQEMQEEDEVDPIKPFIEATSPKVKESVEHPFA 568 Query: 281 GFKIILDPLNPDTRRAPSKQGQFQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKAPP 460 IL+P + R +PS +G+ LFA +T E +++ L K V PP Sbjct: 569 N---ILNPKKREERLSPSGKGKHLLFAPRITAHPSESVFKILDGSPL-KLRVMAS-SLPP 623 Query: 461 A 463 A Sbjct: 624 A 624 >AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family protein 1, isoform f protein. Length = 1769 Score = 29.9 bits (64), Expect = 1.5 Identities = 30/121 (24%), Positives = 48/121 (39%) Frame = +2 Query: 101 LVSAALACELNPGPGVGSKSPGDNHYRLIVNGEVERYAPDQRYVVTLVGSRTHDVVQQFA 280 +V +A+ + VGS S R+ E + P + ++ V FA Sbjct: 509 IVESAVTVTCSHEEDVGSHSSLQTVRRIQEMQEEDEVDPIKPFIEATSPKVKESVEHPFA 568 Query: 281 GFKIILDPLNPDTRRAPSKQGQFQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKAPP 460 IL+P + R +PS +G+ LFA +T E +++ L K V PP Sbjct: 569 N---ILNPKKREERLSPSGKGKHLLFAPRITAHPSESVFKILDGSPL-KLRVMAS-SLPP 623 Query: 461 A 463 A Sbjct: 624 A 624 >AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family protein 1, isoform e protein. Length = 1769 Score = 29.9 bits (64), Expect = 1.5 Identities = 30/121 (24%), Positives = 48/121 (39%) Frame = +2 Query: 101 LVSAALACELNPGPGVGSKSPGDNHYRLIVNGEVERYAPDQRYVVTLVGSRTHDVVQQFA 280 +V +A+ + VGS S R+ E + P + ++ V FA Sbjct: 509 IVESAVTVTCSHEEDVGSHSSLQTVRRIQEMQEEDEVDPIKPFIEATSPKVKESVEHPFA 568 Query: 281 GFKIILDPLNPDTRRAPSKQGQFQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKAPP 460 IL+P + R +PS +G+ LFA +T E +++ L K V PP Sbjct: 569 N---ILNPKKREERLSPSGKGKHLLFAPRITAHPSESVFKILDGSPL-KLRVMAS-SLPP 623 Query: 461 A 463 A Sbjct: 624 A 624 >AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family protein 1, isoform d protein. Length = 1769 Score = 29.9 bits (64), Expect = 1.5 Identities = 30/121 (24%), Positives = 48/121 (39%) Frame = +2 Query: 101 LVSAALACELNPGPGVGSKSPGDNHYRLIVNGEVERYAPDQRYVVTLVGSRTHDVVQQFA 280 +V +A+ + VGS S R+ E + P + ++ V FA Sbjct: 509 IVESAVTVTCSHEEDVGSHSSLQTVRRIQEMQEEDEVDPIKPFIEATSPKVKESVEHPFA 568 Query: 281 GFKIILDPLNPDTRRAPSKQGQFQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKAPP 460 IL+P + R +PS +G+ LFA +T E +++ L K V PP Sbjct: 569 N---ILNPKKREERLSPSGKGKHLLFAPRITAHPSESVFKILDGSPL-KLRVMAS-SLPP 623 Query: 461 A 463 A Sbjct: 624 A 624 >AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family protein 1, isoform c protein. Length = 1769 Score = 29.9 bits (64), Expect = 1.5 Identities = 30/121 (24%), Positives = 48/121 (39%) Frame = +2 Query: 101 LVSAALACELNPGPGVGSKSPGDNHYRLIVNGEVERYAPDQRYVVTLVGSRTHDVVQQFA 280 +V +A+ + VGS S R+ E + P + ++ V FA Sbjct: 509 IVESAVTVTCSHEEDVGSHSSLQTVRRIQEMQEEDEVDPIKPFIEATSPKVKESVEHPFA 568 Query: 281 GFKIILDPLNPDTRRAPSKQGQFQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKAPP 460 IL+P + R +PS +G+ LFA +T E +++ L K V PP Sbjct: 569 N---ILNPKKREERLSPSGKGKHLLFAPRITAHPSESVFKILDGSPL-KLRVMAS-SLPP 623 Query: 461 A 463 A Sbjct: 624 A 624 >Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical protein ZK617.1c protein. Length = 6629 Score = 28.7 bits (61), Expect = 3.3 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Frame = +2 Query: 326 APSKQGQFQLFADTLTK--FDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVY 499 A + + F TL K FD+ + E D K V + WK PPA G ++ V Sbjct: 2618 AEGESDPLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWK-PPANDGGAPIEEYVV 2676 Query: 500 E 502 E Sbjct: 2677 E 2677 >Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical protein ZK617.1b protein. Length = 7158 Score = 28.7 bits (61), Expect = 3.3 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Frame = +2 Query: 326 APSKQGQFQLFADTLTK--FDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVY 499 A + + F TL K FD+ + E D K V + WK PPA G ++ V Sbjct: 3147 AEGESDPLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWK-PPANDGGAPIEEYVV 3205 Query: 500 E 502 E Sbjct: 3206 E 3206 >Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical protein ZK617.1a protein. Length = 6839 Score = 28.7 bits (61), Expect = 3.3 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Frame = +2 Query: 326 APSKQGQFQLFADTLTK--FDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVY 499 A + + F TL K FD+ + E D K V + WK PPA G ++ V Sbjct: 2828 AEGESDPLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWK-PPANDGGAPIEEYVV 2886 Query: 500 E 502 E Sbjct: 2887 E 2887 >Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein ZK617.1c protein. Length = 6629 Score = 28.7 bits (61), Expect = 3.3 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Frame = +2 Query: 326 APSKQGQFQLFADTLTK--FDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVY 499 A + + F TL K FD+ + E D K V + WK PPA G ++ V Sbjct: 2618 AEGESDPLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWK-PPANDGGAPIEEYVV 2676 Query: 500 E 502 E Sbjct: 2677 E 2677 >Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein ZK617.1b protein. Length = 7158 Score = 28.7 bits (61), Expect = 3.3 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Frame = +2 Query: 326 APSKQGQFQLFADTLTK--FDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVY 499 A + + F TL K FD+ + E D K V + WK PPA G ++ V Sbjct: 3147 AEGESDPLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWK-PPANDGGAPIEEYVV 3205 Query: 500 E 502 E Sbjct: 3206 E 3206 >Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein ZK617.1a protein. Length = 6839 Score = 28.7 bits (61), Expect = 3.3 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Frame = +2 Query: 326 APSKQGQFQLFADTLTK--FDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVY 499 A + + F TL K FD+ + E D K V + WK PPA G ++ V Sbjct: 2828 AEGESDPLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWK-PPANDGGAPIEEYVV 2886 Query: 500 E 502 E Sbjct: 2887 E 2887 >X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. Length = 6048 Score = 28.7 bits (61), Expect = 3.3 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Frame = +2 Query: 326 APSKQGQFQLFADTLTK--FDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVY 499 A + + F TL K FD+ + E D K V + WK PPA G ++ V Sbjct: 2037 AEGESDPLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWK-PPANDGGAPIEEYVV 2095 Query: 500 E 502 E Sbjct: 2096 E 2096 >L15314-2|AAF99983.1| 322|Caenorhabditis elegans Hypothetical protein K06H7.7 protein. Length = 322 Score = 28.7 bits (61), Expect = 3.3 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 4/40 (10%) Frame = -3 Query: 218 PAHIAQLLR*QSACSDC----LQVTLNLLQDLDLARRPVP 111 P H ++L+ +C DC L V + L LDL+ P+P Sbjct: 170 PGHFVEMLKEDCSCRDCGSADLAVKVRLTVPLDLSDIPIP 209 >Z97628-3|CAB10727.1| 819|Caenorhabditis elegans Hypothetical protein F43G9.12 protein. Length = 819 Score = 28.3 bits (60), Expect = 4.4 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = +2 Query: 302 PLNPDTRRAPSKQGQFQLFA-DTLTKFDEECTNSVVEADDLPKTE 433 PL+ DT++ SK + +L D DEECTN A +L +TE Sbjct: 188 PLD-DTQKLKSKSERNRLIREDENDDSDEECTNKFYSARELLRTE 231 >Z79755-13|CAB02114.1| 819|Caenorhabditis elegans Hypothetical protein F43G9.12 protein. Length = 819 Score = 28.3 bits (60), Expect = 4.4 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = +2 Query: 302 PLNPDTRRAPSKQGQFQLFA-DTLTKFDEECTNSVVEADDLPKTE 433 PL+ DT++ SK + +L D DEECTN A +L +TE Sbjct: 188 PLD-DTQKLKSKSERNRLIREDENDDSDEECTNKFYSARELLRTE 231 >Z79753-4|CAB02084.2| 396|Caenorhabditis elegans Hypothetical protein F20G2.4 protein. Length = 396 Score = 28.3 bits (60), Expect = 4.4 Identities = 18/76 (23%), Positives = 35/76 (46%) Frame = -2 Query: 495 TIAFKSTHPEPAGGAFHMTWTSVLGRSSASTTEFVHSSSNLVKVSAKSWNCPCLLGALLV 316 TI+F + PEP F+ T+ + G ++++ + N++ + +WN + + Sbjct: 284 TISF-NYKPEPVSDGFYSTFVYITGEANSTIEITMEGLENVICTAGCTWN------GVEI 336 Query: 315 SGFKGSRIILKPANCC 268 + SR I P CC Sbjct: 337 KSREDSR-ITSPVMCC 351 >AC087079-13|AAK27866.1| 787|Caenorhabditis elegans Nuclear pore complex protein protein13, isoform a protein. Length = 787 Score = 28.3 bits (60), Expect = 4.4 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -3 Query: 278 QTVVLRHECGNRPESRHISDPAHIAQLLR*QSACSD 171 + + L HECG R +S H++ AH LR +D Sbjct: 448 RAIYLLHECGQRVDSVHVAVLAHKLGYLRMSKKSTD 483 >AC006638-10|AAK85488.1| 242|Caenorhabditis elegans Hypothetical protein F41G4.8 protein. Length = 242 Score = 27.9 bits (59), Expect = 5.9 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Frame = +2 Query: 92 WLGLVSAALACELNPGPGVGSKSPGDNHY--RLIVNGEVERYAPDQRYVVT 238 +L L+SAA++C+ G G ++ D ++ RLI N + Y + Y +T Sbjct: 5 FLYLLSAAVSCQFQDFEGSGEEALIDEYWLQRLIENVGIPHYLTQKAYQLT 55 >AF098987-5|ABD63222.1| 263|Caenorhabditis elegans Hypothetical protein F40H3.1b protein. Length = 263 Score = 27.5 bits (58), Expect = 7.7 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +1 Query: 148 RFKVTWRQSLQADC*RRS*AICAGSEICR 234 R K+ WRQS+ +C +S A CA E C+ Sbjct: 201 RSKIRWRQSVCEEC--KSVAECANCEECK 227 >AF098987-4|AAC67429.1| 496|Caenorhabditis elegans Hypothetical protein F40H3.1a protein. Length = 496 Score = 27.5 bits (58), Expect = 7.7 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +1 Query: 148 RFKVTWRQSLQADC*RRS*AICAGSEICR 234 R K+ WRQS+ +C +S A CA E C+ Sbjct: 434 RSKIRWRQSVCEEC--KSVAECANCEECK 460 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,089,160 Number of Sequences: 27780 Number of extensions: 300973 Number of successful extensions: 818 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 785 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 817 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1279376318 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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