Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k05r
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.1  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   1.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   7.8  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   7.8  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 486 IRVSEKSATCMFCHSIVGFNFSGTDSL 566
           IR  ++ + CM+ + ++GF     D L
Sbjct: 664 IRAKKRWSQCMYMYFLLGFRLQANDEL 690


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 486 IRVSEKSATCMFCHSIVGFNFSGTDSL 566
           IR  ++ + CM+ + ++GF     D L
Sbjct: 664 IRAKKRWSQCMYMYFLLGFRLQANDEL 690


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +3

Query: 486 IRVSEKSATCMFCHSIVGFNFSGTDSL 566
           IR  ++ + CM+ + ++GF +   D L
Sbjct: 117 IRAKKRWSQCMYMYFLLGFRYLVNDEL 143


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +3

Query: 486 IRVSEKSATCMFCHSIVGFNFSGTDSL 566
           IR  ++ + CM+ + ++GF +   D L
Sbjct: 431 IRAKKRWSQCMYMYFLLGFRYLVNDEL 457


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 239 KRIYPLTCFMFYSITRFRS 295
           +++YP+  F+ Y+IT   S
Sbjct: 32  QKLYPVLMFLIYTITEIYS 50


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 258  PVLCSIVLPGFVLLIISVSTSKPWSS 335
            P LC+ +  GF +L  S  T KP  S
Sbjct: 2347 PSLCTHINYGFAVLDSSSMTLKPHDS 2372


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 476 RYVHSSF*EICYLH 517
           R V  SF +ICYLH
Sbjct: 217 RRVFISFSKICYLH 230


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 476 RYVHSSF*EICYLH 517
           R V  SF +ICYLH
Sbjct: 235 RRVFISFSKICYLH 248


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +2

Query: 224 LGTGQKRIYPLTCFMFYSITRFRSTNNISK 313
           LG     ++   C++   + RFR +  +SK
Sbjct: 28  LGINSSFVHKEHCYVLVRLARFRDSVKLSK 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,340
Number of Sequences: 336
Number of extensions: 3627
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)