Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k05f
         (681 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    27   0.72 
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    26   0.96 
U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.          24   3.9  
DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.    24   3.9  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   3.9  
AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.       23   6.7  

>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 26.6 bits (56), Expect = 0.72
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +1

Query: 412 NKDYSKFAENQSQYVH-EFPRLSVPEKLKPTIEW 510
           N+ Y  + E Q  ++   FP  +VP+ LKPTI +
Sbjct: 21  NQRYRFWVERQVPFLEPSFPAGNVPDTLKPTIHF 54


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 268 DDEDNLDIVSPCFKISPDVQLKEVPTNGEEY 360
           DD+   D+++  F++ PDV+ K V   G+EY
Sbjct: 367 DDQTPTDVLTDVFQVPPDVE-KYVGFCGKEY 396


>U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.
          Length = 140

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +1

Query: 16  ITNKTAFPITRMKL*KN---IVQIISVNNYEYCCTGYISFDC 132
           + N++AF  +     KN      I  +NN  +C +GY S DC
Sbjct: 49  VQNESAFSTSATNKNKNGSTDYGIFQINNKYWCDSGYGSNDC 90


>DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.
          Length = 140

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +1

Query: 16  ITNKTAFPITRMKL*KN---IVQIISVNNYEYCCTGYISFDC 132
           + N++AF  +     KN      I  +NN  +C +GY S DC
Sbjct: 49  VQNESAFSTSATNKNKNGSTDYGIFQINNKYWCDSGYGSNDC 90


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 178 YVL*IVNVIISQSCNLVKKMSLKKYLKTMKDDEDNLDIVSP 300
           YV+ ++N I   SC    +  L+K+ + +K   D +  V+P
Sbjct: 74  YVIAVINKITFCSCYAPPRWDLEKFEEMLKRISDEVYDVNP 114


>AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.
          Length = 112

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 569 DSKRDMYIRVSEKSATCMFCHSIVGF 492
           DS  D Y R+   SA   F   ++GF
Sbjct: 74  DSAGDKYSRLVRTSARAKFVEHVIGF 99


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,488
Number of Sequences: 2352
Number of extensions: 12961
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)