Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k05f
         (681 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069703-1|AAL39848.2|  266|Drosophila melanogaster LD47479p pro...    42   0.001
AE014296-3108|AAF49187.1|  245|Drosophila melanogaster CG10419-P...    42   0.001
AE013599-1574|AAF58464.1|  535|Drosophila melanogaster CG12488-P...    29   7.8  

>AY069703-1|AAL39848.2|  266|Drosophila melanogaster LD47479p
           protein.
          Length = 266

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
 Frame = +1

Query: 283 LDIVSPCFKISPDVQLKEVPTNGEEYLLKVIKERKNI-AAVTKCNKDYSKFAENQSQYVH 459
           L+I  P     P    ++ P +GEEYL+ +  ERK   A VTK +        N +  + 
Sbjct: 36  LEICEPDSSFDP----QKPPESGEEYLMHMFYERKRCPAVVTKRSSKIRNNTGNTTLEML 91

Query: 460 EFPRLSVPEKLKPTIEWQNMQVADFSETRMYI 555
           + P L   + L PT EW++ QV  F   R  +
Sbjct: 92  DNPELPPFKCLLPTPEWRDEQVKSFQAARSQV 123


>AE014296-3108|AAF49187.1|  245|Drosophila melanogaster CG10419-PA
           protein.
          Length = 245

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
 Frame = +1

Query: 283 LDIVSPCFKISPDVQLKEVPTNGEEYLLKVIKERKNI-AAVTKCNKDYSKFAENQSQYVH 459
           L+I  P     P    ++ P +GEEYL+ +  ERK   A VTK +        N +  + 
Sbjct: 15  LEICEPDSSFDP----QKPPESGEEYLMHMFYERKRCPAVVTKRSSKIRNNTGNTTLEML 70

Query: 460 EFPRLSVPEKLKPTIEWQNMQVADFSETRMYI 555
           + P L   + L PT EW++ QV  F   R  +
Sbjct: 71  DNPELPPFKCLLPTPEWRDEQVKSFQAARSQV 102


>AE013599-1574|AAF58464.1|  535|Drosophila melanogaster CG12488-PA
           protein.
          Length = 535

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 12/48 (25%), Positives = 27/48 (56%)
 Frame = +1

Query: 265 KDDEDNLDIVSPCFKISPDVQLKEVPTNGEEYLLKVIKERKNIAAVTK 408
           KD+E +  ++  C +   D+++++VP       +K + E++ IA + K
Sbjct: 294 KDEEPDYAVIDECRRRVSDIEIEDVPMIVSSTPMKPLDEQQCIAQIIK 341


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,253,400
Number of Sequences: 53049
Number of extensions: 479314
Number of successful extensions: 1207
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)